RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ISOC2Q96AB3 205 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 RTN4RQ9BZR6 473 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 CHODLQ9H9P2 273 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 HSF4Q9ULV5 492 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 HILPDAQ9Y5L2 63 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 CD226Q15762 336 aa16.02■□□□□ 0.16
SNX27-202ENST00000368841 MDH2P40926 338 aaKnown RBP16.02■□□□□ 0.16
SNX27-202ENST00000368841 CISD3P0C7P0 127 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 CCL3P10147 92 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 RPL29P47914 159 aaKnown RBP16.02■□□□□ 0.15
SNX27-202ENST00000368841 C21orf58P58505 322 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 ZNF880Q6PDB4 577 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 SH2D2AQ9NP31 389 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 NKX2-2O95096 273 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 TMEM211Q6ICI0 200 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 P2RX4Q99571 388 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 FKBP11Q9NYL4 201 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 CCL21O00585 134 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 NDUFB6O95139 128 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 PRNTQ86SH4 94 aa16.02■□□□□ 0.15
SNX27-202ENST00000368841 IGHV3-72A0A0B4J1Y9 119 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 H7C2G1 150 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 J3QR89 54 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 GABRA1P14867 456 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 B2MP61769 119 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 FAHD2BQ6P2I3 314 aaPredicted RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 GAPTQ8N292 157 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 FAM222BQ8WU58 562 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 FAHD2AQ96GK7 314 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 MESTQ5EB52 335 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 SLC25A30Q5SVS4 291 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 HDHD3Q9BSH5 251 aaPredicted RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 SCGB1D4Q6XE38 83 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 RAB1CQ92928 201 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 MS4A10Q96PG2 267 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 AKIRIN1Q9H9L7 192 aaPredicted RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 TCFL5Q9UL49 500 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 LANCL1O43813 399 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 CIDEAO60543 219 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 KCNE1BA0A087WTH5 132 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 GSTZ1O43708 216 aaPredicted RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 GCSHP23434 173 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 SSX1Q16384 188 aa16.01■□□□□ 0.15
SNX27-202ENST00000368841 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
SNX27-202ENST00000368841 TRAV38-1A0A0B4J264 116 aa16■□□□□ 0.15
SNX27-202ENST00000368841 LIAT1Q6ZQX7 453 aa16■□□□□ 0.15
SNX27-202ENST00000368841 TPRX1Q8N7U7 411 aa16■□□□□ 0.15
SNX27-202ENST00000368841 SLC25A1P53007 311 aa16■□□□□ 0.15
SNX27-202ENST00000368841 TMED3Q9Y3Q3 217 aa16■□□□□ 0.15
SNX27-202ENST00000368841 OR5B21A6NL26 309 aa16■□□□□ 0.15
SNX27-202ENST00000368841 S100A8P05109 93 aa16■□□□□ 0.15
SNX27-202ENST00000368841 ZNF547Q8IVP9 402 aa16■□□□□ 0.15
SNX27-202ENST00000368841 GPBAR1Q8TDU6 330 aa16■□□□□ 0.15
SNX27-202ENST00000368841 IL20Q9NYY1 176 aa16■□□□□ 0.15
SNX27-202ENST00000368841 CST4P01036 141 aa16■□□□□ 0.15
SNX27-202ENST00000368841 SPCS3P61009 180 aa16■□□□□ 0.15
SNX27-202ENST00000368841 CLRN3Q8NCR9 226 aa16■□□□□ 0.15
SNX27-202ENST00000368841 NEIL1Q96FI4 390 aaPredicted RBP16■□□□□ 0.15
SNX27-202ENST00000368841 GSX1Q9H4S2 264 aaPredicted RBP16■□□□□ 0.15
SNX27-202ENST00000368841 EXOGQ9Y2C4 368 aaKnown RBP16■□□□□ 0.15
SNX27-202ENST00000368841 CHST1O43916 411 aa16■□□□□ 0.15
SNX27-202ENST00000368841 CEACAM3P40198 252 aa16■□□□□ 0.15
SNX27-202ENST00000368841 ZBTB37Q5TC79 503 aa16■□□□□ 0.15
SNX27-202ENST00000368841 CCL28Q9NRJ3 127 aa16■□□□□ 0.15
SNX27-202ENST00000368841 TECRQ9NZ01 308 aaKnown RBP16■□□□□ 0.15
SNX27-202ENST00000368841 PEX11BO96011 259 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 NXPH1P58417 271 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 ZDHHC22Q8N966 263 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 PDCD6O75340 191 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 SKP2Q13309 424 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 SLC25A40Q8TBP6 338 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 GPX7Q96SL4 187 aaPredicted RBP15.99■□□□□ 0.15
SNX27-202ENST00000368841 GGTLC2Q14390 218 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 D2HGDHQ8N465 521 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 OR2C3Q8N628 320 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 OR2D3Q8NGH3 330 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 OR5A2Q8NGI9 324 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 OR4X1Q8NH49 305 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 ATP5SQ99766 215 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 CYSLTR2Q9NS75 346 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 KCNMB2Q9Y691 235 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 TRDCB7Z8K6 153 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 TRA2AQ13595 282 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNX27-202ENST00000368841 MRM2Q9UI43 246 aaKnown RBP15.99■□□□□ 0.15
SNX27-202ENST00000368841 STARD10Q9Y365 291 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 OOEPA6NGQ2 149 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 IL11P20809 199 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 COL10A1Q03692 680 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 SLC16A13Q7RTY0 426 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 RASL10BQ96S79 203 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 FRRS1LQ9P0K9 344 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 SCN3AQ9NY46 2000 aa15.99■□□□□ 0.15
SNX27-202ENST00000368841 AREGP15514 252 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 ZP3P21754 424 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 CCKARP32238 428 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 Q6ZN92 141 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 INSIG2Q9Y5U4 225 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 MPC2O95563 127 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms