RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TRAPPC6BQ86SZ2 158 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 TGIF2LYQ8IUE0 185 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 SETD6Q8TBK2 473 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 OCSTAMPQ9BR26 566 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 IFT46Q9NQC8 304 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 KLK11Q9UBX7 282 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 AK3Q9UIJ7 227 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 ELF5Q9UKW6 265 aaPredicted RBP10.32□□□□□ -0.76
TUBE1-202ENST00000368662 DOPEY2Q9Y3R5 2298 aa10.32□□□□□ -0.76
TUBE1-202ENST00000368662 TANC2Q9HCD6 1990 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 NDUFA2O43678 99 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 DTYMKP23919 212 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 HOXA4Q00056 320 aaPredicted RBP10.31□□□□□ -0.76
TUBE1-202ENST00000368662 GUCA2AQ02747 115 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 COL10A1Q03692 680 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 OLFML2AQ68BL7 652 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF57Q68EA5 555 aaPredicted RBP10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF561Q8N587 486 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 OR5T2Q8NGG2 359 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 CHST6Q9GZX3 395 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 MYOZ1Q9NP98 299 aaPredicted RBP10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF222Q9UK12 451 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 EDARQ9UNE0 448 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 IGHV3OR15-7A0A075B7D8 119 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 LANCL1O43813 399 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 RP2O75695 350 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 CSN2P05814 226 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 COL8A2P25067 703 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 COL8A1P27658 744 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 RCVRNP35243 200 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 GABRA2P47869 451 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 BTG1P62324 171 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 IFITM3Q01628 133 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 FAM201AQ5SY85 155 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ATPAF1Q5TC12 328 aaPredicted RBP10.31□□□□□ -0.76
TUBE1-202ENST00000368662 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 CD177Q8N6Q3 437 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 SDSLQ96GA7 329 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 TIMD4Q96H15 378 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF665Q9H7R5 613 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 CHODLQ9H9P2 273 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 DCAF16Q9NXF7 216 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 ETAA1Q9NY74 926 aa10.31□□□□□ -0.76
TUBE1-202ENST00000368662 CENPEQ02224 2701 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 NKX6-3A6NJ46 265 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 CENPXA8MT69 81 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 HSPB6O14558 160 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 SSX5O60225 188 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 CEBPDP49716 269 aaPredicted RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 TMEM33P57088 247 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 PAX5Q02548 391 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 DYRK1AQ13627 763 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 MUC20Q8N307 709 aaPredicted RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 BPIFB2Q8N4F0 458 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 DEFB108BQ8NET1 73 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 OR5D13Q8NGL4 314 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 MED30Q96HR3 178 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 COX4I2Q96KJ9 171 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 SNX22Q96L94 193 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 C7orf50Q9BRJ6 194 aaKnown RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 FAM234AQ9H0X4 552 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 CHMP1AQ9HD42 196 aaPredicted RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 USF3Q68DE3 2245 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ANKRD20A5PA0PJZ0 165 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 MEIS3P1A6NDR6 274 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 PSPNO60542 156 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF205O95201 554 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 NAPSAO96009 420 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 FAUP35544 74 aaKnown RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 TAS2R19P59542 299 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ASAH1Q13510 395 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF788Q6ZQV5 615 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 SLC36A1Q7Z2H8 476 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 RAB1CQ92928 201 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 PPA2Q9H2U2 334 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 TMEM165Q9HC07 324 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF701Q9NV72 531 aaPredicted RBP10.3□□□□□ -0.76
TUBE1-202ENST00000368662 ANAPC10Q9UM13 185 aa10.3□□□□□ -0.76
TUBE1-202ENST00000368662 FASNP49327 2511 aaKnown RBP10.29□□□□□ -0.76
TUBE1-202ENST00000368662 SPG11Q96JI7 2443 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 TRBV6-6A0A0A6YYG2 114 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF737O75373 536 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 GYPAP02724 150 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 NAT1P18440 290 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 TBPP20226 339 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 IL13RA1P78552 427 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 KLF9Q13886 244 aaPredicted RBP10.29□□□□□ -0.76
TUBE1-202ENST00000368662 RGS21Q2M5E4 152 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 C17orf107Q6ZR85 190 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 HOGA1Q86XE5 327 aa10.29□□□□□ -0.76
TUBE1-202ENST00000368662 GAPTQ8N292 157 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms