RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 PECRQ9BY49 303 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
PTPRK-205ENST00000368213 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 OR4E1P0C645 316 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 ADIRFQ15847 76 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 MPV17LQ2QL34 196 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 Q6ZT83 130 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 LRRTM1Q86UE6 522 aa9.37□□□□□ -0.91
PTPRK-205ENST00000368213 RANGRFQ9HD47 186 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-205ENST00000368213 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 AKR1C3P42330 323 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 TIMM23BQ5SRD1 257 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 FNDC7Q5VTL7 733 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 C2orf50Q96LR7 162 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 NEUROG3Q9Y4Z2 214 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 SVILO95425 2214 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 A0A0G2JMZ2 1700 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 LRRC37A2A6NM11 1700 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 C4orf51C9J302 202 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 RRASP10301 218 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 OPCMLQ14982 345 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PHYHD1Q5SRE7 291 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 OR4C16Q8NGL9 310 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 DYNC2LI1Q8TCX1 351 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 WDR13Q9H1Z4 485 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 ABCA7Q8IZY2 2146 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 AHCTF1Q8WYP5 2266 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PPIAL4CA0A0B4J2A2 164 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 A0A1W2PNV4 684 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PGA4P0DJD7 388 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PGA3P0DJD8 388 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PPIAL4GP0DN37 164 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 TEX30Q5JUR7 227 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 HIST2H3PS2Q5TEC6 136 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF418Q8TF45 676 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 R3HDM4Q96D70 268 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF488Q96MN9 340 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PARP12Q9H0J9 701 aaKnown RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 SLA2Q9H6Q3 261 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 A0A1W2PPE3 182 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 GAPDHP04406 335 aaKnown RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 OR2B8PP59922 312 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 ARF6P62330 175 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PDZK1IP1Q13113 114 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 LINC00596Q86U02 117 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 OR8G5Q8NG78 346 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 APELAP0DMC3 54 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
PTPRK-205ENST00000368213 NDUFA6P56556 154 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 NHLH1Q02575 133 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 PLEKHA2Q9HB19 425 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 KLK11Q9UBX7 282 aa9.36□□□□□ -0.91
PTPRK-205ENST00000368213 C3orf85A0A1B0GTC6 90 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 TMEM229AB2RXF0 380 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 LIMS3P0CW19 117 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 LIMS4P0CW20 117 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 GNLYP22749 145 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 EVX1P49640 407 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 UBE2MP61081 183 aaKnown RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 GNG13Q9P2W3 67 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 IL19Q9UHD0 177 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 MGST3O14880 152 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 LOXL3P58215 753 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 OR2F1Q13607 317 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 P2RX4Q99571 388 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 TRAV39A0A0B4J263 110 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 K7N7A8 449 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 TGFAP01135 160 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 IGHA2P01877 340 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 UMODP07911 640 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 CTRB1P17538 263 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 CTRB2Q6GPI1 263 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 NEU4Q8WWR8 484 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 HGDQ93099 445 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 LHX4Q969G2 390 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 CHST5Q9GZS9 411 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 RNF122Q9H9V4 155 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 NAGKQ9UJ70 344 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF236Q9UL36 1845 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 SIPA1L1O43166 1804 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 TAAR5O14804 337 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 FFAR1O14842 300 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 ASAH2BP0C7U1 165 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms