RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 ODAMA1E959 279 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 ZNF44P15621 663 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 ATF1P18846 271 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 NFYBP25208 207 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 LMO1P25800 156 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 KRBOX4Q5JUW0 171 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 C12orf73Q69YU5 71 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 OR10H4Q8NGA5 316 aa13.24□□□□□ -0.29
MRPL55-217ENST00000366746 ADAT3Q96EY9 351 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-217ENST00000366746 A0A087X0M5 115 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 A0A1B0GX30 115 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 ZNF729A6NN14 1252 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-217ENST00000366746 ZAR1LA6NP61 321 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-217ENST00000366746 APOL3O95236 402 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 ZNF20P17024 532 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 EPHA2P29317 976 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 SLC35B1P78383 322 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 HES1Q14469 280 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 CHST4Q8NCG5 386 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 OR9G1Q8NH87 305 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 TFAP2CQ92754 450 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 TOMM40LQ969M1 308 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 RFT1Q96AA3 541 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 SPSB1Q96BD6 273 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 FGGYQ96C11 551 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-217ENST00000366746 OR6C3Q9NZP0 311 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 GNG8Q9UK08 70 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 AMMECR1Q9Y4X0 333 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-217ENST00000366746 U3KQK5 164 aa13.23□□□□□ -0.29
MRPL55-217ENST00000366746 TCRBV3S1A0A5B6 114 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A18PA6NE21 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A16PA6NEW6 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A20PA6NIJ5 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A9PA6NNJ1 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A12PA8MX19 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A5PA8MXJ8 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 RAMP3O60896 148 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 CSN2P05814 226 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A15PP0C7V4 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A13PP0C7W8 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A14PP0C7W9 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 FAM90A24PP0C7X0 464 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 HTR1FP30939 366 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 BNIP1Q12981 228 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 TMEM244Q5VVB8 128 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 COMMD1Q8N668 190 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 ZNF565Q8N9K5 539 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 HRASLS5Q96KN8 279 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 OPALINQ96PE5 141 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 COMMD4Q9H0A8 199 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 NEK6Q9HC98 313 aa13.22□□□□□ -0.29
MRPL55-217ENST00000366746 IGKV1-12A0A0C4DH73 117 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 KBTBD11-OT1A0A1B0GTJ5 212 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 H0YHG0 523 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 DEGS1O15121 323 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 KDM4BO94953 1096 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 IGKV1D-12P01611 117 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 TMEM11P17152 192 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 KIR3DL2P43630 455 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 GP2P55259 537 aaKnown RBP13.21□□□□□ -0.29
MRPL55-217ENST00000366746 RAB25P57735 213 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 HNF4GQ14541 408 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 C17orf58Q2M2W7 97 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 DRAM1Q8N682 238 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 C5orf56Q8N8D9 126 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 CCDC197Q8NCU1 140 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 UTP4Q969X6 686 aaKnown RBP13.21□□□□□ -0.29
MRPL55-217ENST00000366746 COQ2Q96H96 371 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 P2RX4Q99571 388 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
MRPL55-217ENST00000366746 G3V2T6 193 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 J3QR06 171 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-217ENST00000366746 GYG2O15488 501 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 FGF16O43320 207 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 ATXN7L3Q14CW9 347 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-217ENST00000366746 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 UTF1Q5T230 341 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 FOXRED2Q8IWF2 684 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 OR5D18Q8NGL1 313 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
MRPL55-217ENST00000366746 IGHV3-7P01780 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms