RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
SMC5-201ENST00000361138 NGFRP08138 427 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
SMC5-201ENST00000361138 TDHQ8IZJ6 230 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 OR1L6Q8NGR2 347 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 GPBAR1Q8TDU6 330 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 MMP16P51512 607 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 RARRES2Q99969 163 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 A0A1W2PPC4 97 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 KLK2P20151 261 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 USF1P22415 310 aaPredicted RBP12.28□□□□□ -0.44
SMC5-201ENST00000361138 P2RY4P51582 365 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 PRDX4Q13162 271 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 LRP11Q86VZ4 500 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 SFTPA1Q8IWL2 248 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 M1APQ8TC57 530 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 FAM60AQ9NP50 221 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 SERTM2A0A1B0GWG4 89 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 LIPT2A6NK58 231 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 TTRP02766 147 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 VDAC1P21796 283 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 S100A7P31151 101 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 REC114Q7Z4M0 266 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 OR10G3Q8NGC4 313 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 TMEM30CPA0ZSE6 113 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 J3QR89 54 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
SMC5-201ENST00000361138 PLXNB2O15031 1838 aa12.28□□□□□ -0.44
SMC5-201ENST00000361138 LINC00587B1AMM8 73 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 CBR3O75828 277 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 BCL2P10415 239 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 CXCL12P48061 93 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 OR1P1Q8NH06 330 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.44
SMC5-201ENST00000361138 AMELYQ99218 206 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 HIF1ANQ9NWT6 349 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 KLF4O43474 513 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 EFNB1P98172 346 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 HLA-DRB5Q30154 266 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 OR2V1Q8NHB1 315 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 CCDC74BQ96LY2 380 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.44
SMC5-201ENST00000361138 SLC2A8Q9NY64 477 aa12.27□□□□□ -0.44
SMC5-201ENST00000361138 COX7A2P2O60397 106 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.45
SMC5-201ENST00000361138 ACER2Q5QJU3 275 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 TCF21O43680 179 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 OR5G3P0C626 314 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 GPR3P46089 330 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 CEBPEQ15744 281 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 ANKRD37Q7Z713 158 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 TBX15Q96SF7 602 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 ESRP2Q9H6T0 727 aaKnown RBP12.27□□□□□ -0.45
SMC5-201ENST00000361138 NUP214P35658 2090 aaPredicted RBP12.27□□□□□ -0.45
SMC5-201ENST00000361138 PDE6DO43924 150 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 SOX15O60248 233 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 CER1O95813 267 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.45
SMC5-201ENST00000361138 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
SMC5-201ENST00000361138 SRP14P37108 136 aaKnown RBP12.26□□□□□ -0.45
SMC5-201ENST00000361138 C1orf100Q5SVJ3 147 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 C5orf66Q9H5L9 145 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 GOLT1BQ9Y3E0 138 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 C1QL1O75973 258 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 ISG15P05161 165 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 DANCRP0C864 163 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 SPINK9Q5DT21 86 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 OR1L3Q8NH93 324 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 TAAR3PQ9P1P4 343 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 TRAV14DV4A0A0A6YYC5 116 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 FAM157BP0CG42 384 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 AMTP48728 403 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
SMC5-201ENST00000361138 DYRK2Q92630 601 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 ZNF32P17041 273 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 LSM6P62312 80 aaKnown RBP12.26□□□□□ -0.45
SMC5-201ENST00000361138 IGFBP7Q16270 282 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 TMEM211Q6ICI0 200 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 LINC00696Q6ZRV3 163 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
SMC5-201ENST00000361138 C4orf51C9J302 202 aa12.25□□□□□ -0.45
SMC5-201ENST00000361138 ADAM11O75078 769 aa12.25□□□□□ -0.45
SMC5-201ENST00000361138 THY1P04216 161 aa12.25□□□□□ -0.45
SMC5-201ENST00000361138 RAC1P63000 192 aa12.25□□□□□ -0.45
SMC5-201ENST00000361138 Q8IYB0 196 aa12.25□□□□□ -0.45
SMC5-201ENST00000361138 TBX21Q9UL17 535 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms