RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 ST6GALNAC3Q8NDV1 305 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 NPRL2Q8WTW4 380 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 RAB3CQ96E17 227 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 NICN1Q9BSH3 213 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A096LPE4 126 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 TRGV8A0A0C4DH27 118 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A1W2PPZ6 126 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 GNB3P16520 340 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 TBPP20226 339 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 MPZP25189 248 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 ZNF92Q03936 586 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 ARL6IP1Q15041 203 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 GUSBP1Q15486 140 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 LHFPL2Q6ZUX7 228 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 PIGTQ969N2 578 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 BANF2Q9H503 90 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 DMRT1Q9Y5R6 373 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 MYO7BQ6PIF6 2116 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 OR2AT4A6NND4 320 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 SLC31A2O15432 143 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 NRASP01111 189 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 GLI4P10075 376 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 PTGER4P35408 488 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 OR3A2P47893 321 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 SSX2Q16385 188 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 C1QL2Q7Z5L3 287 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM17Q86X19 198 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 SVBPQ8N300 66 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 PRR13Q9NZ81 148 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A1B0GW55 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 IL2RAP01589 272 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 HLA-HP01893 362 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L2P0CJ85 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L3P0CJ86 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L4P0CJ87 422 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L5P0CJ88 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L6P0CJ89 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4L7P0CJ90 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 MTCP1P56278 107 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM50BP56557 158 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 IL13RA1P78552 427 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 PLP2Q04941 152 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 OR2A2Q6IF42 318 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 OR51T1Q8NGJ9 327 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM231Q9H6L2 316 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 CHMP1AQ9HD42 196 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 SLC2A8Q9NY64 477 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 DUX4Q9UBX2 424 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 ANAPC10Q9UM13 185 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 OSGIN2Q9Y236 505 aa11.92□□□□□ -0.5
CSNK1E-201ENST00000359867 ARID1AO14497 2285 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 ZNF816-ZNF321PA0A0X1KG74 233 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 SOCS1O15524 211 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 TNFSF13O75888 250 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 CD79AP11912 226 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 ZBTB25P24278 435 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 RBP2P50120 134 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 FUT6P51993 359 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 TAS2R60P59551 318 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 SPCS3P61009 180 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 RAB1AP62820 205 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 SRSF3P84103 164 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 ASCL4Q6XD76 172 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 OR5D18Q8NGL1 313 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 OR1K1Q8NGR3 316 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 KMT2BQ9UMN6 2715 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A1W2PP11 408 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 MFNGO00587 321 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 OR2F2O95006 317 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 SERPINA5P05154 406 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 ZNF44P15621 663 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 HRH1P35367 487 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 PPT1P50897 306 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 OR2F1Q13607 317 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 RNF212Q495C1 297 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 ACOT7LQ6ZUV0 252 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 NANOS1Q8WY41 292 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 APOBEC3DQ96AK3 386 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 BORCS8Q96FH0 119 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 PRRT1Q99946 306 aa11.91□□□□□ -0.5
CSNK1E-201ENST00000359867 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms