RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 IGHV3OR15-7A0A075B7D8 119 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 LINC00854A0A1B0GVQ3 168 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 OOEPA6NGQ2 149 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 DTYMKP23919 212 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 MICBQ29980 383 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 HFEQ30201 348 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 PAN3Q58A45 887 aaKnown RBP20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 SFRP4Q6FHJ7 346 aaPredicted RBP20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 GVQW1Q8N7I0 195 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 OR5T2Q8NGG2 359 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 DYRK2Q92630 601 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 C7orf50Q9BRJ6 194 aaKnown RBP20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 CHST6Q9GZX3 395 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 C11orf54Q9H0W9 315 aaPredicted RBP20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 C12orf4Q9NQ89 552 aa20.83■□□□□ 0.92
SHARPIN-201ENST00000359551 OVOL3O00110 214 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 LGALS8O00214 317 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 PSPNO60542 156 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 NAPSAO96009 420 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 MDH2P40926 338 aaKnown RBP20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 HOGA1Q86XE5 327 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF295-AS1Q8N0V1 137 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 BPIFB2Q8N4F0 458 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 TMEM229BQ8NBD8 167 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 COX4I2Q96KJ9 171 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 IFT46Q9NQC8 304 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 DLL4Q9NR61 685 aa20.82■□□□□ 0.92
SHARPIN-201ENST00000359551 HSPB6O14558 160 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 LYRM1O43325 122 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 RP2O75695 350 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 MRPS15P82914 257 aaKnown RBP20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 COL10A1Q03692 680 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 GAPTQ8N292 157 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 METRNQ9UJH8 293 aa20.81■□□□□ 0.92
SHARPIN-201ENST00000359551 PPIAL4EA0A075B759 164 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TMEM82A0PJX8 343 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 PPIAL4DF5H284 164 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF737O75373 536 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 FSTL3O95633 263 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 PTTG1O95997 202 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 FCGR3AP08637 254 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 PPIAL4FP0DN26 164 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 AMY2BP19961 511 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 COL8A2P25067 703 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TAS2R19P59542 299 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 C17orf107Q6ZR85 190 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 NEK7Q8TDX7 302 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 C14orf79Q96F83 325 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 SDSLQ96GA7 329 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 RIMS4Q9H426 269 aaPredicted RBP20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 ETAA1Q9NY74 926 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 PPIAL4AQ9Y536 164 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 USP9YO00507 2555 aaPredicted RBP20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TENM4Q6N022 2769 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 DCHS2Q6V1P9 2916 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TRAV38-1A0A0B4J264 116 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF205O95201 554 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TFF1P04155 84 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 KCNJ3P48549 501 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 Q6ZPA2 131 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 CHPT1Q8WUD6 406 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 SNAPC3Q92966 411 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 PPA2Q9H2U2 334 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TMEM165Q9HC07 324 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 EDARQ9UNE0 448 aa20.8■□□□□ 0.92
SHARPIN-201ENST00000359551 TRBV6-6A0A0A6YYG2 114 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 POM121CA8CG34 1229 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 CD74P04233 296 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 CDKN1AP38936 164 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 RFX2P48378 723 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 PAX5Q02548 391 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 OXA1LQ15070 435 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 ATPAF1Q5TC12 328 aaPredicted RBP20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 PLPPR1Q8TBJ4 325 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 SHARPINQ9H0F6 387 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 HRASLSQ9HDD0 168 aa20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF230Q9UIE0 474 aaPredicted RBP20.79■□□□□ 0.92
SHARPIN-201ENST00000359551 FASNP49327 2511 aaKnown RBP20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 CD3DP04234 171 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 CSN2P05814 226 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 FCER2P06734 321 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 OR3A1P47881 315 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 SRSF7Q16629 238 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 OR52W1Q6IF63 320 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 MZT2BQ6NZ67 158 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF788Q6ZQV5 615 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 DEFB108BQ8NET1 73 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 OR4S1Q8NGB4 309 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 PSMG3-AS1Q96PY0 264 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 ST6GALNAC5Q9BVH7 336 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 DNTTIP1Q9H147 329 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF701Q9NV72 531 aaPredicted RBP20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 MAB21L2Q9Y586 359 aa20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 UTP20O75691 2785 aaKnown RBP20.78■□□□□ 0.92
SHARPIN-201ENST00000359551 CENPXA8MT69 81 aa20.77■□□□□ 0.92
SHARPIN-201ENST00000359551 ZNF736B4DX44 427 aaPredicted RBP20.77■□□□□ 0.92
SHARPIN-201ENST00000359551 TNFRSF13BO14836 293 aaPredicted RBP20.77■□□□□ 0.92
SHARPIN-201ENST00000359551 AKAIN1P0CW23 69 aa20.77■□□□□ 0.92
SHARPIN-201ENST00000359551 TBPP20226 339 aa20.77■□□□□ 0.92
SHARPIN-201ENST00000359551 GABRA2P47869 451 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms