RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAHP16930 419 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 ATP6V0CP27449 155 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 TSPO2Q5TGU0 170 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 KIRREL2Q6UWL6 708 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 LIAT1Q6ZQX7 453 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 LCORQ96JN0 433 aaPredicted RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 MMP25Q9NPA2 562 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 TRGC1P0CF51 173 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 STARD6P59095 220 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 CCL27Q9Y4X3 112 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 A0A087WWC5 75 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 IL2RAP01589 272 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF542PQ5EBM4 170 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 TAAR6Q96RI8 345 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM30AQ9NV96 361 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF253O75346 499 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 MT-ND6P03923 174 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 GLB1P16278 677 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PLGLAQ15195 96 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 LANCL2Q9NS86 450 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PEF1Q9UBV8 284 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 TRAV8-7A0A075B6U6 113 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PGFP49763 221 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 KIAA0895LQ68EN5 471 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 H1FOOQ8IZA3 346 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 HEXA-AS1Q9H8Q6 139 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ANKRD10Q9NXR5 420 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 NPIPB8E9PQR5 432 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 FKBP2P26885 142 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 CISD2Q8N5K1 135 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 LIPHQ8WWY8 451 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 CTXND1A0A1B0GTU2 59 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 HOXB2P14652 356 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 SP3Q02447 781 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 KMT5CQ86Y97 462 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 WDFY1Q8IWB7 410 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 OR52L2PQ8NGH6 319 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 FGF13Q92913 245 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 RSG1Q9BU20 258 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 OR5B21A6NL26 309 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 COMPP49747 757 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 UBE2NP61088 152 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 MLF2Q15773 248 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 EOGTQ5NDL2 527 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 OR8A1Q8NGG7 326 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 OR4D11Q8NGI4 311 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PECRQ9BY49 303 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 TRBV11-1A0A0K0K1C0 115 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 H3BNC9 293 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 DANCRP0C864 163 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 RHOBP62745 196 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 DAPP1Q9UN19 280 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 MYADML2A6NDP7 307 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 H3BP45 60 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 CSN3P07498 182 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 POC1AQ8NBT0 407 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 NCOR1P1Q9H4R4 102 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ALPK3Q96L96 1907 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 SRSF10O75494 262 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 KIR3DX1Q9H7L2 352 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 TUBA4BQ9H853 241 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 APOBEC1P41238 236 aaKnown RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 OR3A4PP47883 348 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 C16orf52Q8NHV5 167 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 SLC25A43Q8WUT9 341 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 CORTO00230 105 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF117Q03924 483 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 MESTQ5EB52 335 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 GPX7Q96SL4 187 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-203ENST00000358544 GPA33Q99795 319 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 PKIBQ9C010 78 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF835Q9Y2P0 537 aa5.39□□□□□ -1.55
VPS13B-203ENST00000358544 HLA-DQA1P01909 254 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 FGF5P12034 268 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 MEF2BQ02080 365 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 CD226Q15762 336 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 LTC4SQ16873 150 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TSEN54Q7Z6J9 526 aaKnown RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 OR10S1Q8NGN2 331 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 C2orf72A6NCS6 295 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 RAMP1O60894 148 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 MELTFP08582 738 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 GCH1P30793 250 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 KLF3P57682 345 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 DMRTC1Q5HYR2 192 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 C20orf196Q8IYI0 205 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 ANAPC1Q9H1A4 1944 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 FBLL1A6NHQ2 334 aaKnown RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 M0R135 149 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 CDS2O95674 445 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 CA2P00918 260 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 LINC00614P0C842 121 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TNFSF10P50591 281 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 EID2BQ96D98 161 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms