RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KTI12Q96EK9 354 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 TNFRSF19Q9NS68 423 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 HDGFL3Q9Y3E1 203 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 CFDP00746 253 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 RCC1P18754 421 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 DNAJB12Q9NXW2 375 aaKnown RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 TICRRQ7Z2Z1 1910 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 Q56UQ5 140 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 ZG16BQ96DA0 208 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 A8MXK9 166 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 MLF2Q15773 248 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 C6orf201Q7Z4U5 140 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FGF13Q92913 245 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 SRD5A3Q9H8P0 318 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 UBTD1Q9HAC8 227 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 ANXA10Q9UJ72 324 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 SBF1O95248 1867 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 CDS2O95674 445 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 VDAC1P21796 283 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 DCAF12L2Q5VW00 463 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 ADAD2Q8NCV1 583 aaKnown RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 UTP23Q9BRU9 249 aaKnown RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 SIP14410 1827 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 NEURL1O76050 574 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FAM87AP0C7U9 286 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 GJA4P35212 333 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 IGFBP7Q16270 282 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF764Q96H86 408 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 LANCL2Q9NS86 450 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FRRS1LQ9P0K9 344 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 UBR3Q6ZT12 1888 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 IGLV3-16A0A075B6K0 115 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 PRF1P14222 555 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 MRAP2Q96G30 205 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM204Q9BSN7 226 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 LPAR5Q9H1C0 372 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SP1P08047 785 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 KIR2DS2P43631 304 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SUMO3P55854 103 aaPredicted RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 GPA33Q99795 319 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 IER2Q9BTL4 223 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 MRM2Q9UI43 246 aaKnown RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SLC22A20A6NK97 555 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 IDSB3KWA1 339 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 BCL3P20749 454 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 FCARP24071 287 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 IER3P46695 156 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 NT5CQ8TCD5 201 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 GAL3ST2Q9H3Q3 398 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM167BQ9NRX6 74 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CBLN4Q9NTU7 201 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TAAR3PQ9P1P4 343 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TBC1D29Q9UFV1 150 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 EPPINO95925 133 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CCR2P41597 374 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 PNLIPRP2P54317 469 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TSPO2Q5TGU0 170 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 ACSM6Q6P461 480 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 NUP37Q8NFH4 326 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 HSPB9Q9BQS6 159 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 STARD10Q9Y365 291 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 USF3Q68DE3 2245 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 VWA8A3KMH1 1905 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CXorf51AA0A1B0GTR3 108 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SNURFLB1AK76 121 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SIGLEC5O15389 551 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 GABRA6Q16445 453 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CA13Q8N1Q1 262 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 SGMS2Q8NHU3 365 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 MBNL1Q9NR56 388 aaKnown RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF256Q9Y2P7 627 aaPredicted RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM30CPA0ZSE6 113 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 ANKRD34CP0C6C1 535 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 TBC1D26Q86UD7 250 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 OR5AS1Q8N127 324 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 PTX4Q96A99 478 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 H3BNC9 293 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 F11P03951 625 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 HSPB1P04792 205 aaKnown RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 FAM53BQ14153 422 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 OR6C1Q96RD1 312 aa7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CDCA3Q99618 268 aaPredicted RBP7.79□□□□□ -1.16
COL6A6-201ENST00000358511 CXorf1O96002 111 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 MT-ND6P03923 174 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 MICBQ29980 383 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF770Q6IQ21 691 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM91Q6ZNR0 172 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 LINC01465Q8N7H1 131 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 GPR61Q9BZJ8 451 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 HES4Q9HCC6 221 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM30AQ9NV96 361 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OR6C3Q9NZP0 311 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 PLXNA2O75051 1894 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 HAX1O00165 279 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 NDUFB7P17568 137 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms