RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 OR10D3Q8NH80 312 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 SARAFQ96BY9 339 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 TM4SF19Q96DZ7 209 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 TAAR9Q96RI9 348 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 COL4A5P29400 1685 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 FCN1O00602 326 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 FGF2P09038 288 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 ROM1Q03395 351 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF260Q3ZCT1 412 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 LAMTOR1Q6IAA8 161 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 GAPTQ8N292 157 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 GPR132Q9UNW8 380 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 A0A0B4J293 547 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 DXOO77932 396 aaKnown RBP13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 RASL10BQ96S79 203 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 KCNE5Q9UJ90 142 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 LOXL2Q9Y4K0 774 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 GVINP1Q7Z2Y8 2422 aa13.73□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR5B21A6NL26 309 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 PTBP3O95758 552 aaKnown RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 UBE2V2Q15819 145 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 LINC00518Q8N0U6 118 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 POM121L2Q96KW2 1035 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 MFRPQ9BY79 579 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 CHST5Q9GZS9 411 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 CCL28Q9NRJ3 127 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 LYRM2Q9NU23 88 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 TRBV5-7A0A0A0MS05 114 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 COX7A2P2O60397 106 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 SPINK4O60575 86 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 PNPP00491 289 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 KIR2DL1P43626 348 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 CSN1S1P47710 185 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 GUSBP11Q6P575 273 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF383Q8NA42 475 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 OR10X1Q8NGY0 326 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 KIAA1324LA8MWY0 1029 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 M0R143 59 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 FCGR3BO75015 233 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 CYC1P08574 325 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 SRD5A2P31213 254 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 C1orf100Q5SVJ3 147 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 NSUN5P2Q63ZY6 315 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 TMEM211Q6ICI0 200 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 ZNF835Q9Y2P0 537 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 TRDCB7Z8K6 153 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 HES1Q14469 280 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 ACY3Q96HD9 319 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 FAM173AQ9BQD7 235 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 LPAR5Q9H1C0 372 aa13.72□□□□□ -0.21
TRAPPC11-202ENST00000357207 DBX1A6NMT0 343 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 DMWDQ09019 674 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 COL19A1Q14993 1142 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 IGFBP7Q16270 282 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 MRGPRGQ86SM5 289 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 LDLRAD3Q86YD5 345 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 FBXO17Q96EF6 278 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 KIAA1456Q9P272 454 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 PILRAQ9UKJ1 303 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 PSG11Q9UQ72 335 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 CCKARP32238 428 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 RBPJQ06330 500 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 FOXO1Q12778 655 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 IL11RAQ14626 422 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 CXorf67Q86X51 503 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 PITPNC1Q9UKF7 332 aa13.71□□□□□ -0.21
TRAPPC11-202ENST00000357207 HOXD4P09016 255 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC11-202ENST00000357207 CHRNB4P30926 498 aa13.71□□□□□ -0.22
TRAPPC11-202ENST00000357207 NHLH2Q02577 135 aa13.71□□□□□ -0.22
TRAPPC11-202ENST00000357207 Q3ZCU0 254 aa13.71□□□□□ -0.22
TRAPPC11-202ENST00000357207 YIF1AO95070 293 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 CCL2P13500 99 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 PNLIPP16233 465 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 TMEM11P17152 192 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 KHDC3LQ587J8 217 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 WNT2BQ93097 391 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 HDHD3Q9BSH5 251 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 MPC1Q9Y5U8 109 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A1W2PP11 408 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 MEX3AA1L020 520 aaKnown RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 IL2RAP01589 272 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 BMP5P22003 454 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR3A1P47881 315 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 SMAD4Q13485 552 aaKnown RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 ACER2Q5QJU3 275 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 TCTEX1D1Q8N7M0 179 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNRF4Q8WWF5 429 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 PROCRQ9UNN8 238 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR5H1A6NKK0 313 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms