RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 DYNLT3P51808 116 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 OR8B12Q8NGG6 310 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 OR10G8Q8NGN5 311 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 TNFRSF12AQ9NP84 129 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 ASCL3Q9NQ33 180 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 GPR27Q9NS67 375 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 LIPT2A6NK58 231 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 MFNGO00587 321 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SMPD2O60906 423 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 CTSVO60911 334 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 CXorf1O96002 111 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 PGA4P0DJD7 388 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 PGA5P0DJD9 388 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 CLDN18P56856 261 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 PMS2P11Q13670 270 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 ST3GAL2Q16842 350 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 HLA-DRB5Q30154 266 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 BSXQ3C1V8 233 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SH2D5Q6ZV89 423 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 COX14Q96I36 57 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SLC25A33Q9BSK2 321 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 TMEM204Q9BSN7 226 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 WDR54Q9H977 334 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SLC52A3Q9NQ40 469 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SIRT7Q9NRC8 400 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 TMEM38BQ9NVV0 291 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 NTMQ9P121 344 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 FBXL17Q9UF56 701 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 TMEFF2Q9UIK5 374 aaPredicted RBP5.71□□□□□ -1.5
UPF2-201ENST00000356352 C11orf94C9JXX5 98 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 H3BMH7 237 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 M0QZK8 103 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 M0R296 226 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 GGCTO75223 188 aaKnown RBP5.71□□□□□ -1.5
UPF2-201ENST00000356352 RAB9AP51151 201 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 WNT3P56703 355 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 ISXQ2M1V0 245 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 FAM27D1Q5T7N8 215 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 OTPQ5XKR4 325 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 ZNF441Q8N8Z8 693 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 OR10A7Q8NGE5 316 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 OR2T10Q8NGZ9 312 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 SNRNP40Q96DI7 357 aaKnown RBP5.71□□□□□ -1.5
UPF2-201ENST00000356352 VAX2Q9UIW0 290 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 A0A1B0GUL6 1792 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 A0A1B0GU03 582 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 CORTO00230 105 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 CDKN2AP42771 156 aaKnown RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR10D4PQ8NGN7 298 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 TMEM171Q8WVE6 324 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR2H1Q9GZK4 316 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 R3HDMLQ9H3Y0 253 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 PLSCR3Q9NRY6 295 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 WASHC3Q9Y3C0 194 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PNLIPP16233 465 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 VDAC1P21796 283 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 COL8A1P27658 744 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 MNX1P50219 401 aaPredicted RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 C19orf57Q0VDD7 668 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 C1orf53Q5VUE5 145 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 LILRA6Q6PI73 481 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 MOGAT3Q86VF5 341 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 D2HGDHQ8N465 521 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SYT8Q8NBV8 401 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR5A2Q8NGI9 324 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR4P4Q8NGL7 312 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SMIM12Q96EX1 92 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PLPPR2Q96GM1 343 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 TMPRSS13Q9BYE2 586 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 ZNF385DQ9H6B1 395 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 INSIG2Q9Y5U4 225 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 KLF7O75840 302 aaPredicted RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 PEX11BO96011 259 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 MELTFP08582 738 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PPP1CCP36873 323 aaKnown RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 ACAA2P42765 397 aaKnown RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 CD81P60033 236 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 ERVFRD-1P60508 538 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PSG5Q15238 335 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PWWP2BQ6NUJ5 590 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 MUC15Q8N387 334 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 STPG2Q8N412 459 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 GPX7Q96SL4 187 aaPredicted RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 PLA2G2FQ9BZM2 168 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 CDC42EP3Q9UKI2 254 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 FAM74A7A6NL05 159 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OGG1O15527 345 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 DAOP14920 347 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SPNP16150 400 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 CAMPP49913 170 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SULT1A1P50225 295 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SLC35B1P78383 322 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 PDCD1Q15116 288 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 CD226Q15762 336 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SLC23A3Q6PIS1 610 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms