RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 DUSP13Q9UII6 198 aa21.79■■□□□ 1.08
CLK2-201ENST00000355560 C1QTNF9BB2RNN3 333 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 CCSO14618 274 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 DEGS1O15121 323 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 C1QTNF9P0C862 333 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 LPCAT3Q6P1A2 487 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 ASB13Q8WXK3 278 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 Q9N2K0 584 aa21.78■■□□□ 1.08
CLK2-201ENST00000355560 KNG1P01042 644 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 SUPT4H1P63272 117 aaKnown RBP21.77■■□□□ 1.08
CLK2-201ENST00000355560 Q6P435 159 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 CLEC18BQ6UXF7 455 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 Q6ZS49 121 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 KCTD9Q7L273 389 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 SPERTQ8NA61 448 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 PCNX1Q96RV3 2341 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 SPTA1P02549 2419 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 A6NLC8 198 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 ATP6V1G2-DDX39BF2Z307 99 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 C16orf97H3BN30 126 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 SFT2D2O95562 160 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 FCGR2CP31995 323 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 NKX6-1P78426 367 aaPredicted RBP21.77■■□□□ 1.08
CLK2-201ENST00000355560 RBM39Q14498 530 aaKnown RBP21.77■■□□□ 1.08
CLK2-201ENST00000355560 SLC9A3R2Q15599 337 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 LGALSLQ3ZCW2 172 aaPredicted RBP21.77■■□□□ 1.08
CLK2-201ENST00000355560 PRAMEF6Q5VXH4 476 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 ZNF826PQ6ZT77 177 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 LRP11Q86VZ4 500 aa21.77■■□□□ 1.08
CLK2-201ENST00000355560 RGS11O94810 467 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 GLRXP35754 106 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 GLP1RP43220 463 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 SRSF7Q16629 238 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLK2-201ENST00000355560 C1QTNF12Q5T7M4 302 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 VHLLQ6RSH7 139 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 C11orf53Q8IXP5 236 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 POC1AQ8NBT0 407 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 GTF3AQ92664 365 aaKnown RBP21.76■■□□□ 1.07
CLK2-201ENST00000355560 TOMM40LQ969M1 308 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 CLEC4MQ9H2X3 399 aaPredicted RBP21.76■■□□□ 1.07
CLK2-201ENST00000355560 JKAMPQ9P055 326 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 SHANK1Q9Y566 2161 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 ATP6V1G1O75348 118 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 OR2H2O95918 312 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 ZNF250P15622 560 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 IGSF11Q5DX21 431 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 PDCD10Q9BUL8 212 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 FXYD6Q9H0Q3 95 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 TLNRD1Q9H1K6 362 aa21.76■■□□□ 1.07
CLK2-201ENST00000355560 PIEZO1Q92508 2521 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 NCOR2Q9Y618 2525 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 TSC22D2O75157 780 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 SLC34A2O95436 690 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 GLAP06280 429 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 CTSDP07339 412 aaPredicted RBP21.75■■□□□ 1.07
CLK2-201ENST00000355560 ZNF81P51508 661 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 FXYD4P59646 89 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 KLRB1Q12918 225 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 ZNF146Q15072 292 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 MRPL30Q8TCC3 161 aaKnown RBP21.75■■□□□ 1.07
CLK2-201ENST00000355560 RIMS4Q9H426 269 aaPredicted RBP21.75■■□□□ 1.07
CLK2-201ENST00000355560 UFSP2Q9NUQ7 469 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 ZZEF1O43149 2961 aa21.75■■□□□ 1.07
CLK2-201ENST00000355560 A0A1B0GWJ7 208 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 SIRPB1O00241 398 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 NOS1APO75052 506 aaPredicted RBP21.74■■□□□ 1.07
CLK2-201ENST00000355560 ACAA1P09110 424 aaPredicted RBP21.74■■□□□ 1.07
CLK2-201ENST00000355560 RPS2P15880 293 aaKnown RBP21.74■■□□□ 1.07
CLK2-201ENST00000355560 HLA-GP17693 338 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 RND1Q92730 232 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 HES4Q9HCC6 221 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 DBX1A6NMT0 343 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 CD40P25942 277 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 SSTR2P30874 369 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 KLF3P57682 345 aaPredicted RBP21.74■■□□□ 1.07
CLK2-201ENST00000355560 PAN3Q58A45 887 aaKnown RBP21.74■■□□□ 1.07
CLK2-201ENST00000355560 SPIN3Q5JUX0 258 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 OR2Z1Q8NG97 314 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 DHRS9Q9BPW9 319 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 PRR13Q9NZ81 148 aa21.74■■□□□ 1.07
CLK2-201ENST00000355560 KIR2DS1A0A191URI9 304 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 PLSCR5A0PG75 271 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 FAM25EA8MYX2 175 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 SLC33A1O00400 549 aaPredicted RBP21.73■■□□□ 1.07
CLK2-201ENST00000355560 IGHV3-13P01766 116 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 SCTP09683 121 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 ZNF728P0DKX0 622 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 NFYAP23511 347 aaPredicted RBP21.73■■□□□ 1.07
CLK2-201ENST00000355560 KIR2DS4P43632 304 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 KIR2DS1Q14954 304 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 FIP1L1Q6UN15 594 aaKnown RBP21.73■■□□□ 1.07
CLK2-201ENST00000355560 WDR82Q6UXN9 313 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 C20orf204Q6ZNR8 217 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 TMEM171Q8WVE6 324 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 USB1Q9BQ65 265 aaKnown RBP21.73■■□□□ 1.07
CLK2-201ENST00000355560 SYT3Q9BQG1 590 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 ATP23Q9Y6H3 246 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 SORDQ00796 357 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 C5orf24Q7Z6I8 188 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 OR5T2Q8NGG2 359 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 393.6 ms