RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PAN3Q58A45 887 aaKnown RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 EHFQ9NZC4 300 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 ANXA10Q9UJ72 324 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 C17orf100A8MU93 164 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 DEFB108AA8MXU0 73 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 SLC33A1O00400 549 aaPredicted RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 SDCBPO00560 298 aaPredicted RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 GLAP06280 429 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 HNRNPCP07910 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 EGR1P18146 543 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 ANXA7P20073 488 aaKnown RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 TSPAN5P62079 268 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 ZMYND11Q15326 602 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 OR13C8Q8NGS7 320 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 DIRC2Q96SL1 478 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 SLC25A21Q9BQT8 299 aaPredicted RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 PPA2Q9H2U2 334 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 ZNF286AQ9HBT8 521 aa17.31■□□□□ 0.36
TRIM4-202ENST00000354241 CISD1Q9NZ45 108 aaKnown RBP17.31■□□□□ 0.36
TRIM4-202ENST00000354241 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 SMG1Q96Q15 3661 aaKnown RBP17.3■□□□□ 0.36
TRIM4-202ENST00000354241 SRRM5B3KS81 715 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 GATA4P43694 442 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 CBX3Q13185 183 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 Q6ZPA2 131 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 HPS1Q92902 700 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 DYNLRB1Q9NP97 96 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 ADGRG4Q8IZF6 3080 aa17.3■□□□□ 0.36
TRIM4-202ENST00000354241 KNG1P01042 644 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 CCL8P80075 99 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 CDK10Q15131 360 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 AKAP14Q86UN6 197 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 ZCCHC24Q8N2G6 241 aaKnown RBP17.29■□□□□ 0.36
TRIM4-202ENST00000354241 ARRDC1Q8N5I2 433 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 GCSAMQ8N6F7 178 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 CHAC2Q8WUX2 184 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 GCM1Q9NP62 436 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 ING3Q9NXR8 418 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 RASL12Q9NYN1 266 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 NAPSAO96009 420 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 LOXP28300 417 aaPredicted RBP17.29■□□□□ 0.36
TRIM4-202ENST00000354241 CFHR2P36980 270 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 CD300CQ08708 224 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 TMEM17Q86X19 198 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 LILRB1Q8NHL6 650 aaPredicted RBP17.29■□□□□ 0.36
TRIM4-202ENST00000354241 TREM2Q9NZC2 230 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 DNAJB11Q9UBS4 358 aa17.29■□□□□ 0.36
TRIM4-202ENST00000354241 C7orf66A4D0T2 115 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 HMX3A6NHT5 357 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 RFPL4AA6NLU0 287 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 RFPL4AL1F8VTS6 287 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 TFF1P04155 84 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 ADH4P08319 380 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 ZNF672Q499Z4 452 aaPredicted RBP17.28■□□□□ 0.36
TRIM4-202ENST00000354241 OVCH2Q7RTZ1 564 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 OR5T2Q8NGG2 359 aa17.28■□□□□ 0.36
TRIM4-202ENST00000354241 ROS1P08922 2347 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 TMEM82A0PJX8 343 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 OR2AT4A6NND4 320 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 PRAF2O60831 178 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 CD55P08174 381 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 MDH2P40926 338 aaKnown RBP17.27■□□□□ 0.36
TRIM4-202ENST00000354241 EFNB3Q15768 340 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 MRPL30Q8TCC3 161 aaKnown RBP17.27■□□□□ 0.36
TRIM4-202ENST00000354241 MRGPRFQ96AM1 343 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 DHRS9Q9BPW9 319 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 GHITMQ9H3K2 345 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 RIMS4Q9H426 269 aaPredicted RBP17.27■□□□□ 0.36
TRIM4-202ENST00000354241 Q9N2K0 584 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 DECR2Q9NUI1 292 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 NECAP2Q9NVZ3 263 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 RNF7Q9UBF6 113 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 DYSFO75923 2080 aa17.27■□□□□ 0.36
TRIM4-202ENST00000354241 IGHV3OR15-7A0A075B7D8 119 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 B9A039 149 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.27■□□□□ 0.35
TRIM4-202ENST00000354241 TNFRSF1AP19438 455 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 ATXN7L3Q14CW9 347 aaPredicted RBP17.27■□□□□ 0.35
TRIM4-202ENST00000354241 TMED4Q7Z7H5 227 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 OR11L1Q8NGX0 322 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 TERB2Q8NHR7 220 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 PLPPR1Q8TBJ4 325 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 ERGIC1Q969X5 290 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 FAM210AQ96ND0 272 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 SEC22CQ9BRL7 303 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 TMEM204Q9BSN7 226 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 OR51J1Q9H342 316 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 TMEM165Q9HC07 324 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 PPP1R3CQ9UQK1 317 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 WIPI2Q9Y4P8 454 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 NPTNQ9Y639 398 aa17.27■□□□□ 0.35
TRIM4-202ENST00000354241 ANKHD1Q8IWZ3 2542 aaKnown RBP17.26■□□□□ 0.35
TRIM4-202ENST00000354241 CYB5R3P00387 301 aaPredicted RBP17.26■□□□□ 0.35
TRIM4-202ENST00000354241 LHBP01229 141 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 GSTT2P0CG29 244 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 VSIG10L2P0DP72 767 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 CD80P33681 288 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 MECP2P51608 486 aaKnown RBP17.26■□□□□ 0.35
TRIM4-202ENST00000354241 TESK1Q15569 626 aa17.26■□□□□ 0.35
TRIM4-202ENST00000354241 GRK1Q15835 563 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms