RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CTSLP07711 333 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CMA1P23946 247 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 F2RP25116 425 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 S100A5P33763 92 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PRSS3P35030 304 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ARR3P36575 388 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 HSPA9P38646 679 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LHX2P50458 406 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 DSCR10P59022 87 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ARPC4P59998 168 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 VSNL1P62760 191 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 IGLV3-21P80748 117 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 IL17AQ16552 155 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM183BQ1AE95 376 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 C15orf32Q32M92 178 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 BSXQ3C1V8 233 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GFI1BQ5VTD9 330 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 MFSD14CQ5VZR4 134 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 STEAP4Q687X5 459 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 HBMQ6B0K9 141 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LYPD2Q6UXB3 125 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 Q6ZTC4 211 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SSX6Q7RTT6 188 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM183AQ8IXX5 376 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LGI3Q8N145 548 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 COX18Q8N8Q8 333 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 Q8N9W7 124 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 BLOC1S5Q8TDH9 187 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PHF10Q8WUB8 498 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 C22orf15Q8WYQ4 148 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TSNAXQ99598 290 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TAPBPLQ9BX59 468 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ING2Q9H160 280 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SAV1Q9H4B6 383 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 NAGKQ9UJ70 344 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RAB3GAP2Q9H2M9 1393 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 DYSFO75923 2080 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 NAV3Q8IVL0 2385 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SPTA1P02549 2419 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 NUP214P35658 2090 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FER1L6Q2WGJ9 1857 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RTL1A6NKG5 1358 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TRAV39A0A0B4J263 110 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV2OR16-5A0A0B4J2B6 119 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 A0A1B0GX12 115 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GOLGA8JA6NMD2 632 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PEX7O00628 323 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 HDAC3O15379 428 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GYG2O15488 501 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CDC40O60508 579 aaKnown RBP eCLIP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FOXH1O75593 365 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SEMA3DO95025 777 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TRBV12-3P01733 135 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 HPNP05981 417 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 S100A1P23297 94 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 NMUP48645 174 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 EIF2B2P49770 351 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 P2RX1P51575 399 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CMC4P56277 68 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CDK5Q00535 292 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 HMGCS1Q01581 520 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 INCA1Q0VD86 236 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 MED21Q13503 144 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 KIAA0040Q15053 153 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR4D1Q15615 310 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FAM182AQ5T1J6 154 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 S100A7AQ86SG5 101 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LRRC6Q86X45 466 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SLC7A5P1Q8MH63 180 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 DRAM1Q8N682 238 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF738Q8NE65 137 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR10G9Q8NGN4 311 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR9Q1Q8NGQ5 310 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR4S2Q8NH73 311 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CDS1Q92903 461 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TM4SF18Q96CE8 201 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 YIPF6Q96EC8 236 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PSMB7Q99436 277 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TIMM17AQ99595 171 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RSG1Q9BU20 258 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC90BQ9GZT6 254 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PARVAQ9NVD7 372 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 KLF13Q9Y2Y9 288 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PCM1Q15154 2024 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 MAP1BP46821 2468 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CCL15-CCL14A0A0B4J2E2 113 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 M0R1X1 148 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 DCTN3O75935 186 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TNNC2P02585 160 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RLN2P04090 185 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 S100A6P06703 90 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 GOLGA8HP0CJ92 632 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TDGF1P13385 188 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF17P17021 662 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 NUDT1P36639 197 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 RPL14P50914 215 aaKnown RBP1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TDGF1P3P51864 188 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 CASP8Q14790 479 aa1.12□□□□□ -2.23
BRCA1-202ENST00000354071 TRIP13Q15645 432 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms