RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ABCA7Q8IZY2 2146 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 DANCRP0C864 163 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 HTR3DQ70Z44 454 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 C17orf78Q8N4C9 275 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR2I1PQ8NGU4 316 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 RNF208Q9H0X6 261 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 THYN1Q9P016 225 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 TCRBV5S1A1TA0A578 114 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 IER5LQ5T953 404 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ZNF707Q96C28 371 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 LDB3O75112 727 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 FTH1P19P0C7X4 201 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SSR4P51571 173 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 C2orf27AQ580R0 203 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ZNF117Q03924 483 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ZNF79Q15937 498 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ANKRD37Q7Z713 158 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR52E1Q8NGJ3 308 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 NAT6Q93015 286 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 MED12LQ86YW9 2145 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ERGP11308 486 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 GLRA1P23415 457 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 STARD6P59095 220 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 A0A1W2PQU0 124 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SYNGR2O43760 224 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 UBE2L3P68036 154 aaKnown RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR51E1Q8TCB6 317 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SLC52A3Q9NQ40 469 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 GDE1Q9NZC3 331 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 A1L4Q6 167 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 PLPP1O14494 284 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 SRSF10O75494 262 aaKnown RBP11.25□□□□□ -0.61
COL6A3-203ENST00000353578 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 RND1Q92730 232 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 ZFP64Q9NPA5 681 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 NRAPQ86VF7 1730 aa11.25□□□□□ -0.61
COL6A3-203ENST00000353578 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 FAM90A26D6RGX4 464 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 PIAS2O75928 621 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 GPRIN1Q7Z2K8 1008 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 KMT5CQ86Y97 462 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 TAAR3PQ9P1P4 343 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OR2A4O95047 310 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 PARS2Q7L3T8 475 aaKnown RBP11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OR2A7Q96R45 310 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OR51B6Q9H340 312 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 STARD10Q9Y365 291 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OXGR1Q96P68 337 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 MRPS18AQ9NVS2 196 aaKnown RBP11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OR1D5P58170 312 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 KLK6Q92876 244 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 RABAC1Q9UI14 185 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 ARID2Q68CP9 1835 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 ATRXP46100 2492 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 FAM181AQ8N9Y4 354 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 WDR13Q9H1Z4 485 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 AUP1Q9Y679 476 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 PMP22Q01453 160 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-203ENST00000353578 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 TCEAL8Q8IYN2 117 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 HSD17B8Q92506 261 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 MRGPRX3Q96LB0 322 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 A0A0B4J2E0 115 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 A0A1B0GX12 115 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 PDCD6O75340 191 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 FAHP16930 419 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OOEPA6NGQ2 149 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 SLC25A17O43808 307 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 CTSVO60911 334 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 OR2J3O76001 311 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 PIGTQ969N2 578 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 VN1R1Q9GZP7 353 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 MOB4Q9Y3A3 225 aa11.24□□□□□ -0.61
COL6A3-203ENST00000353578 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 CDC14BO60729 498 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 CD22P20273 847 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 IFITM2Q01629 132 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 RBM45Q8IUH3 476 aaKnown RBP11.23□□□□□ -0.61
COL6A3-203ENST00000353578 LOC107984156A0A0G2JMH3 177 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 PGGT1BP53609 377 aa11.23□□□□□ -0.61
COL6A3-203ENST00000353578 TMEM211Q6ICI0 200 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms