RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SP9P0CG40 484 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 SRPXP78539 464 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 PLGLB1Q02325 96 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 LINC00696Q6ZRV3 163 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 TP53RKQ96S44 253 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 MED13Q9UHV7 2174 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 FREM2Q5SZK8 3169 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 GPR137BO60478 399 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 FBXO24O75426 580 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 H2AFB1P0C5Y9 115 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 MUC1P15941 1255 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-201ENST00000351487 RAB1AP62820 205 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 OR52M1Q8NGK5 317 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 LYPD6BQ8NI32 183 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 SMIM3Q9BZL3 60 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 TMEM231Q9H6L2 316 aa18.99■□□□□ 0.63
UPF3A-201ENST00000351487 MPPED1O15442 326 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 DIRAS3O95661 229 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 P2RY1P47900 373 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 KCNJ3P48549 501 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 F2RL1P55085 397 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 PLA2G2CQ5R387 149 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 FBXW12Q6X9E4 464 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 MKXQ8IYA7 352 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 SLC35G3Q8N808 338 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 OR5A2Q8NGI9 324 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 LOXL4Q96JB6 756 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 MTCH1Q9NZJ7 389 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 KLF13Q9Y2Y9 288 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-201ENST00000351487 POMT1Q9Y6A1 747 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 C3orf85A0A1B0GTC6 90 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 ZNF732B4DXR9 585 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 ST8SIA3O43173 380 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 NME2P1O60361 137 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 GLI4P10075 376 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 RND3P61587 244 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 MDS2Q8NDY4 140 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 OR4D5Q8NGN0 318 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 IP6K3Q96PC2 410 aa18.98■□□□□ 0.63
UPF3A-201ENST00000351487 ATP6V1G2-DDX39BF2Z307 99 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 SNAPINO95295 136 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 MT-CO3P00414 261 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 NGFP01138 241 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 GNRHRP30968 328 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 DPPA2Q7Z7J5 298 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 HS3ST6Q96QI5 342 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 TMEM222Q9H0R3 208 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 ZDHHC8Q9ULC8 765 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 TRAPPC2LH3BP13 241 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 CDS2O95674 445 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 CD5P06127 495 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 GLAP06280 429 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 SP1P08047 785 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 MEOX1P50221 254 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 ZNF552Q9H707 407 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-201ENST00000351487 FAM96BQ9Y3D0 163 aa18.97■□□□□ 0.63
UPF3A-201ENST00000351487 CD300LBA8K4G0 201 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 ZNHIT1O43257 154 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 TK1P04183 234 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 SEC11BP0C7V7 166 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 PLP2Q04941 152 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 DHRS7BQ6IAN0 325 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 Q6ZRG5 221 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 NUFIP2Q7Z417 695 aaKnown RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 LINC00596Q86U02 117 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 DMBX1Q8NFW5 382 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 IL17BQ9UHF5 180 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 MUC3AQ02505 3323 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 BORCS7-ASMTA0A0B4J1R7 106 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 KIR2DS1A0A191URI9 304 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 CDX4O14627 284 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 KIR2DS4P43632 304 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 KIR2DS1Q14954 304 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 GTF3AQ92664 365 aaKnown RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 BSCL2Q96G97 398 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 TMEM56Q96MV1 263 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 AIFM2Q9BRQ8 373 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 GINS3Q9BRX5 216 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 FAM212BQ9NTI7 297 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-201ENST00000351487 TMEM56-RWDD3S4R434 201 aa18.96■□□□□ 0.63
UPF3A-201ENST00000351487 TRDCB7Z8K6 153 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 RNASEK-C17orf49H0YIS7 233 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 TUSC2O75896 110 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 HERPUD1Q15011 391 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 MCEMP1Q8IX19 187 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 OR5P3Q8WZ94 311 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 USB1Q9BQ65 265 aaKnown RBP18.95■□□□□ 0.62
UPF3A-201ENST00000351487 ADAT1Q9BUB4 502 aaKnown RBP18.95■□□□□ 0.62
UPF3A-201ENST00000351487 PLK3Q9H4B4 646 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 IL36RNQ9UBH0 155 aa18.95■□□□□ 0.62
UPF3A-201ENST00000351487 RCL1Q9Y2P8 373 aaKnown RBP18.95■□□□□ 0.62
UPF3A-201ENST00000351487 KLRC4-KLRK1H3BQV0 150 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 C3AR1Q16581 482 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 MEX3BQ6ZN04 569 aaKnown RBP18.94■□□□□ 0.62
UPF3A-201ENST00000351487 WNT2BQ93097 391 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 HIST1H2AAQ96QV6 131 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 C11orf1Q9H5F2 150 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 WFDC1Q9HC57 220 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 GPR179Q6PRD1 2367 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 SCTP09683 121 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms