RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 PGCP20142 388 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 EXT1Q16394 746 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 PNO1Q9NRX1 252 aaKnown RBP12.35□□□□□ -0.43
RLIM-202ENST00000349225 CST2P09228 141 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 CEACAM1P13688 526 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 MSX1P28360 303 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 GBGT1Q8N5D6 347 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 PLA2G3Q9NZ20 509 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 PLRG1O43660 514 aaKnown RBP12.35□□□□□ -0.43
RLIM-202ENST00000349225 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
RLIM-202ENST00000349225 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
RLIM-202ENST00000349225 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
RLIM-202ENST00000349225 SEC16AO15027 2179 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 MED12Q93074 2177 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TRAV1-1A0A0B4J248 108 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 BIDP55957 195 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TLE4Q04727 773 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TMEM256Q8N2U0 113 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 PIGTQ969N2 578 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 ZNF845Q96IR2 970 aaPredicted RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 Q96M66 194 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 FKBP11Q9NYL4 201 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 LRFN1Q9P244 771 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TDRD6O60522 2096 aaKnown RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 ALG1L2C9J202 215 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 NKX2-1P43699 371 aaPredicted RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 PLPPR1Q8TBJ4 325 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 WNT5BQ9H1J7 359 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 NKX2-4Q9H2Z4 354 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 CNOT4O95628 575 aaKnown RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 HPRT1P00492 218 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 HLA-HP01893 362 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 FCGR2AP12318 317 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 TFPI2P48307 235 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 PAX9P55771 341 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 CALHM1Q8IU99 346 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 ZNF100Q8IYN0 542 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
RLIM-202ENST00000349225 ACY3Q96HD9 319 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 BMFQ96LC9 184 aa12.34□□□□□ -0.43
RLIM-202ENST00000349225 FRG2CA6NGY1 282 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 HSPA12AO43301 675 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 TSPAN2O60636 221 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 FAHP16930 419 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 ADIRFQ15847 76 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 MMABQ96EY8 250 aaPredicted RBP12.33□□□□□ -0.44
RLIM-202ENST00000349225 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 NECAP2Q9NVZ3 263 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 V9GYS6 101 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 TAS2R30P59541 319 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 ARL6IP1Q15041 203 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
RLIM-202ENST00000349225 MRPL13Q9BYD1 178 aaKnown RBP12.33□□□□□ -0.44
RLIM-202ENST00000349225 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
RLIM-202ENST00000349225 SHISA8B8ZZ34 492 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ANGPTL7O43827 346 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ADH1BP00325 375 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 IGKV3-11P04433 115 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
RLIM-202ENST00000349225 CTSEP14091 401 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 TFF2Q03403 129 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 C1orf189Q5VU69 101 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 GRINAQ7Z429 371 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
RLIM-202ENST00000349225 ZNF721Q8TF20 911 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 NAT6Q93015 286 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 RBKSQ9H477 322 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 LRP4O75096 1905 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 DDAH2O95865 285 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 HBE1P02100 147 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 LCATP04180 440 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ANGPTL4Q9BY76 406 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 A0A1W2PPQ1 181 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 GALR1P47211 349 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 OR1D4P47884 311 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
RLIM-202ENST00000349225 HSD17B7P56937 341 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 ZP4Q12836 540 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 THEM4Q5T1C6 240 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 FBXW9Q5XUX1 488 aa12.32□□□□□ -0.44
RLIM-202ENST00000349225 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms