RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 hCG_38984A0A1B0GV85 526 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 TNFSF12O43508 249 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 MED6O75586 246 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 SCGNO76038 276 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 MMP7P09237 267 aaPredicted RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 PSMB6P28072 239 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 OR2B8PP59922 312 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 RAB5BP61020 215 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 RNF141Q8WVD5 230 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 EMG1Q92979 244 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 MARS2Q96GW9 593 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 UQCC1Q9NVA1 299 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 COA4Q9NYJ1 87 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 TFF1P04155 84 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 CTSSP25774 331 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 UBE2NP61088 152 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 SSBP1Q04837 148 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 RPUSD3Q6P087 351 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 PEG10Q86TG7 708 aaKnown RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 MYPOPQ86VE0 399 aaPredicted RBP11.98□□□□□ -0.49
TRIM4-201ENST00000349062 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 OR14J1Q9UGF5 321 aa11.98□□□□□ -0.49
TRIM4-201ENST00000349062 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
TRIM4-201ENST00000349062 DNPH1O43598 174 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 MELTFP08582 738 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 ZNF44P15621 663 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 ADAM5Q6NVV9 412 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 HOGA1Q86XE5 327 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 SECTM1Q8WVN6 248 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 DIRAS3O95661 229 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 HIST1H3AP68431 136 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 HIST2H3PS2Q5TEC6 136 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 HIST2H3AQ71DI3 136 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 TMEM230Q96A57 120 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 Q96M66 194 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 UFSP2Q9NUQ7 469 aa11.97□□□□□ -0.49
TRIM4-201ENST00000349062 MSGN1A6NI15 193 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 GALR2O43603 387 aaPredicted RBP11.96□□□□□ -0.49
TRIM4-201ENST00000349062 ACAA1P09110 424 aaPredicted RBP11.96□□□□□ -0.49
TRIM4-201ENST00000349062 TMEM128Q5BJH2 165 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 SPSB1Q96BD6 273 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 OR10C1Q96KK4 312 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 ASCL1P50553 236 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 PIGPP57054 158 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 RIPPLY2Q5TAB7 128 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
TRIM4-201ENST00000349062 TNRC6AQ8NDV7 1962 aaKnown RBP11.96□□□□□ -0.49
TRIM4-201ENST00000349062 CD300LBA8K4G0 201 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 LRP3O75074 770 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 MUC1P15941 1255 aaPredicted RBP11.96□□□□□ -0.5
TRIM4-201ENST00000349062 CFPP27918 469 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 FABP6P51161 128 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 MECP2P51608 486 aaKnown RBP11.96□□□□□ -0.5
TRIM4-201ENST00000349062 FUT6P51993 359 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 TAS2R46P59540 309 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 SLC30A7Q8NEW0 376 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 OR4A4PQ8NGN8 299 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 OR2J1Q9GZK6 312 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 LIME1Q9H400 295 aa11.96□□□□□ -0.5
TRIM4-201ENST00000349062 RBM7Q9Y580 266 aaKnown RBP11.96□□□□□ -0.5
TRIM4-201ENST00000349062 A6NLC8 198 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 XRCC2O43543 280 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RHBDL1O75783 438 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 NQO2P16083 231 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 TNFSF10P50591 281 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 AADACL3Q5VUY0 350 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 VWA1Q6PCB0 445 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RRNAD1Q96FB5 475 aaKnown RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RTBDNQ9BSG5 229 aaPredicted RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 GPR132Q9UNW8 380 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RELNP78509 3460 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 FIGNL2A6NMB9 653 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 ANKRD30BLA7E2S9 258 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 KLK10O43240 276 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 SFTA3P0C7M3 94 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RCC1P18754 421 aaPredicted RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 FABP9Q0Z7S8 132 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 RAB32Q13637 225 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 IAH1Q2TAA2 248 aaPredicted RBP11.95□□□□□ -0.5
TRIM4-201ENST00000349062 ZDHHC23Q8IYP9 409 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 PIK3IP1Q96FE7 263 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 WDYHV1Q96HA8 205 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 SERPINE3A8MV23 424 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 IL18BPO95998 194 aa11.95□□□□□ -0.5
TRIM4-201ENST00000349062 HERV-K104P61576 105 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms