RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 HERV-K104P61576 105 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 IGSF11Q5DX21 431 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 TOR2AQ5JU69 321 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 WDR31Q8NA23 367 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 SLC25A40Q8TBP6 338 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 ARPC5LQ9BPX5 153 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 ZNF471Q9BX82 626 aaPredicted RBP17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 SLC2A9Q9NRM0 540 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 GLAP06280 429 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 PET100P0DJ07 73 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 ERVS71-1P61550 626 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 AANATQ16613 207 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 SUMF2Q8NBJ7 301 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 ANGPTL6Q8NI99 470 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 NEK7Q8TDX7 302 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 PHYHIPLQ96FC7 376 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 SYT3Q9BQG1 590 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 RSRP1Q9BUV0 290 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 RIMS4Q9H426 269 aaPredicted RBP17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 LUZP4Q9P127 313 aa17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 DSPP15924 2871 aaKnown RBP17.36■□□□□ 0.37
CHRNA3-202ENST00000348639 LRP5LA4QPB2 252 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 POM121CA8CG34 1229 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 IQCF6A8MYZ5 107 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 KCNAB3O43448 404 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 RHBDL1O75783 438 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 PPYP01298 95 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 EIF2S3P41091 472 aaKnown RBP17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 RAB32Q13637 225 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 TMEM187Q14656 261 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 OR1J1Q8NGS3 322 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 RRNAD1Q96FB5 475 aaKnown RBP17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 SUCNR1Q9BXA5 334 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 SLC25A32Q9H2D1 315 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 IFT22Q9H7X7 185 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 GSKIPQ9P0R6 139 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 hCG_1807616A0A1W2PRN6 198 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 K7EM74 188 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 HSPB6O14558 160 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 IFNA21P01568 189 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 SELEP16581 610 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 NHLH1Q02575 133 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 PHLDA2Q53GA4 152 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 WDR86Q86TI4 376 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 PDZD9Q8IXQ8 264 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 C17orf78Q8N4C9 275 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 OR5T2Q8NGG2 359 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 CXorf58Q96LI9 332 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 OR5AC2Q9NZP5 309 aa17.35■□□□□ 0.37
CHRNA3-202ENST00000348639 CACNA1GO43497 2377 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 KIR2DS1A0A191URI9 304 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 F5H0A9 414 aaPredicted RBP17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 I3L521 148 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 SPTBN2O15020 2390 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 TNFSF13O75888 250 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 AGFG2O95081 481 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 OR5AC1P0C628 307 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 KIR2DS4P43632 304 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 KIR2DS1Q14954 304 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 IAH1Q2TAA2 248 aaPredicted RBP17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 Q6ZS92 163 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 RASL12Q9NYN1 266 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 ATP23Q9Y6H3 246 aa17.34■□□□□ 0.37
CHRNA3-202ENST00000348639 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 TRAV24A0A0B4J272 114 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 TRDCB7Z8K6 153 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 TK1P04183 234 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 SCTP09683 121 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 PSG7Q13046 419 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 GGNBP1Q5YKI7 109 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 Q8IYB0 196 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 LRTM2Q8N967 370 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 CCDC71LQ8N9Z2 235 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 DMRTA2Q96SC8 542 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 ADAT1Q9BUB4 502 aaKnown RBP17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 REG4Q9BYZ8 158 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 TUBD1Q9UJT1 453 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 POLDIP2Q9Y2S7 368 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 SHANK1Q9Y566 2161 aa17.33■□□□□ 0.37
CHRNA3-202ENST00000348639 MBD3L4A6NDZ8 208 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 MBD3L3A6NE82 208 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 MBD3L5A6NJ08 208 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 WDR1O75083 606 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 DIRAS3O95661 229 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 CGAP01215 116 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 IGFBP7Q16270 282 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 ALKBH6Q3KRA9 238 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 SP6Q3SY56 376 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 SCCPDHQ8NBX0 429 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 OR1S1Q8NH92 325 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 MBD3L2Q8NHZ7 208 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 KLF14Q8TD94 323 aaPredicted RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 RBPMSQ93062 196 aaKnown RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 MRPL24Q96A35 216 aaKnown RBP17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 STARD4Q96DR4 205 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 AQP10Q96PS8 301 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 DNAJB11Q9UBS4 358 aa17.33■□□□□ 0.36
CHRNA3-202ENST00000348639 PROCRQ9UNN8 238 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms