RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 FAM212BQ9NTI7 297 aaPredicted RBP18.4■□□□□ 0.54
PTPN18-202ENST00000347849 KLF13Q9Y2Y9 288 aaPredicted RBP18.4■□□□□ 0.54
PTPN18-202ENST00000347849 DHRS7CA6NNS2 312 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 ARG2P78540 354 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 HMGN3Q15651 99 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 GUK1Q16774 197 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 C6orf201Q7Z4U5 140 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 ZFP62Q8NB50 900 aaPredicted RBP18.39■□□□□ 0.53
PTPN18-202ENST00000347849 OR2H1Q9GZK4 316 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 MYO7BQ6PIF6 2116 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 A0A096LPE4 126 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 A0A1W2PPZ6 126 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 OR6C6A6NF89 314 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 FOXI3A8MTJ6 420 aaPredicted RBP18.39■□□□□ 0.53
PTPN18-202ENST00000347849 WISP2O76076 250 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 HTR5AP47898 357 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 PIGTQ969N2 578 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 TMEM45BQ96B21 275 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 HDHD3Q9BSH5 251 aaPredicted RBP18.39■□□□□ 0.53
PTPN18-202ENST00000347849 TUBD1Q9UJT1 453 aa18.39■□□□□ 0.53
PTPN18-202ENST00000347849 MCTS1Q9ULC4 181 aaKnown RBP18.39■□□□□ 0.53
PTPN18-202ENST00000347849 hCG_1809904A0A1W2PP81 198 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 A0A1W2PR64 198 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 A0A1W2PRV1 198 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 KLRC4-KLRK1H3BQV0 150 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 POLR2GP62487 172 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPN18-202ENST00000347849 SP6Q3SY56 376 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 UBAC2Q8NBM4 344 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 S100A13Q99584 98 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 LCATP04180 440 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 ARG1P05089 322 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 CCL11P51671 97 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 TSC22D1Q15714 1073 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 NSUN5P2Q63ZY6 315 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 ADAM5Q6NVV9 412 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 FAM24BQ8N5W8 94 aa18.38■□□□□ 0.53
PTPN18-202ENST00000347849 CPEB3Q8NE35 698 aaKnown RBP18.38■□□□□ 0.53
PTPN18-202ENST00000347849 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.38■□□□□ 0.532e-6■■■■□ 19.9
PTPN18-202ENST00000347849 ZNF503-AS2A6NEH8 195 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 MMP7P09237 267 aaPredicted RBP18.37■□□□□ 0.53
PTPN18-202ENST00000347849 FCGR2AP12318 317 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 CD46P15529 392 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 GABRR1P24046 479 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 ARF1P84077 181 aaKnown RBP18.37■□□□□ 0.53
PTPN18-202ENST00000347849 ZNF766Q5HY98 468 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 FAM209BQ5JX69 171 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 GHRLQ9UBU3 117 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 MED19A0JLT2 244 aaPredicted RBP18.37■□□□□ 0.53
PTPN18-202ENST00000347849 SERPINE3A8MV23 424 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 ZNF205O95201 554 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 GLP1RP43220 463 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 SLC10A1Q14973 349 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 KRTAP27-1Q3LI81 207 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 FDCSPQ8NFU4 85 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 REEP6Q96HR9 211 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 SCRT1Q9BWW7 348 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 CHST5Q9GZS9 411 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 SEBOXQ9HB31 216 aaPredicted RBP18.37■□□□□ 0.53
PTPN18-202ENST00000347849 GPR173Q9NS66 373 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 PLEKHJ1Q9NW61 149 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 SPRR3Q9UBC9 169 aa18.37■□□□□ 0.53
PTPN18-202ENST00000347849 TXNL1O43396 289 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 C1QL1O75973 258 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 SYNGR4O95473 234 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 PRF1P14222 555 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 NQO2P16083 231 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 RAB5AP20339 215 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 CAMLGP49069 296 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 OR2B8PP59922 312 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 Q6ZSR3 168 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 LURAP1LQ8IV03 231 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 HAS2Q92819 552 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 PRRG4Q9BZD6 226 aa18.36■□□□□ 0.53
PTPN18-202ENST00000347849 CRYM-AS1A6NIL9 109 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 MBPP02686 304 aaPredicted RBP18.35■□□□□ 0.53
PTPN18-202ENST00000347849 DANCRP0C864 163 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 IGSF11Q5DX21 431 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 NUFIP2Q7Z417 695 aaKnown RBP18.35■□□□□ 0.53
PTPN18-202ENST00000347849 WFDC1Q9HC57 220 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 METTL1Q9UBP6 276 aaKnown RBP18.35■□□□□ 0.53
PTPN18-202ENST00000347849 MIOXQ9UGB7 285 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 A0A1B0GV50 99 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 PRH1P02810 166 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 CTSDP07339 412 aaPredicted RBP18.35■□□□□ 0.53
PTPN18-202ENST00000347849 GLI4P10075 376 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 CD300LFQ8TDQ1 290 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 TUBA4BQ9H853 241 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 PLEKHA2Q9HB19 425 aa18.35■□□□□ 0.53
PTPN18-202ENST00000347849 UMAD1C9J7I0 102 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 DIRAS3O95661 229 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 CCL2P13500 99 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 RRADP55042 308 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 RPUSD3Q6P087 351 aaKnown RBP18.34■□□□□ 0.53
PTPN18-202ENST00000347849 TOMM40LQ969M1 308 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 AKAP13Q12802 2813 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 ZNF587BE7ETH6 402 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 XRCC2O43543 280 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 HLA-HP01893 362 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 PIGPP57054 158 aa18.34■□□□□ 0.53
PTPN18-202ENST00000347849 LIME1Q9H400 295 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms