RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 A0A1W2PP11 408 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 ACTL6AO96019 429 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 PDGFBP01127 241 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 HKR1P10072 659 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 ACKR3P25106 362 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 DYNLT3P51808 116 aa12.92□□□□□ -0.34
NUP50-201ENST00000347635 ZNF808Q8N4W9 903 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
NUP50-201ENST00000347635 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 CLEC18AA5D8T8 446 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 ZNF205O95201 554 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 EIF4E3Q8N5X7 224 aaKnown RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 CLEC18CQ8NCF0 446 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 OR10C1Q96KK4 312 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 RCC2Q9P258 522 aaKnown RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 LAMP3Q9UQV4 416 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 P2RY4P51582 365 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 PRSS12P56730 875 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 CSRP2Q16527 193 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 VHLLQ6RSH7 139 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 FAM234AQ9H0X4 552 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 SPAG17Q6Q759 2223 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 DUSP13Q9UII6 198 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 A0A087WV48 116 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 TRGV8A0A0C4DH27 118 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 BAGE3Q86Y29 109 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 BAGE2Q86Y30 109 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 ADAMTS17Q8TE56 1095 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 FGF11Q92914 225 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
NUP50-201ENST00000347635 SF3B5Q9BWJ5 86 aaKnown RBP12.91□□□□□ -0.34
NUP50-201ENST00000347635 CDRT15L2A8MXV6 281 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 DNPH1O43598 174 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 CYTIPO60759 359 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 PRDX4Q13162 271 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ACOT6Q3I5F7 207 aaPredicted RBP12.9□□□□□ -0.34
NUP50-201ENST00000347635 OR8U1Q8NH10 309 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ERGIC1Q969X5 290 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 TGFBR3LH3BV60 316 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 OR8G1Q15617 311 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 OR8B8Q15620 311 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 PLPPR5Q32ZL2 321 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ADGRG7Q96K78 797 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 TRIOBPQ9H2D6 2365 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 F6UZH7 168 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 PGA4P0DJD7 388 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 RAC3P60763 192 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 IL24Q13007 206 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ENDOGQ14249 297 aaKnown RBP12.9□□□□□ -0.34
NUP50-201ENST00000347635 DCAF10Q5QP82 559 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ATP5SQ99766 215 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 MLF1P58340 268 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
NUP50-201ENST00000347635 ATRAIDQ6UW56 229 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 OSGIN2Q9Y236 505 aa12.9□□□□□ -0.34
NUP50-201ENST00000347635 ACTL6BO94805 426 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 PPYP01298 95 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 FGF7P21781 194 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 TMEM18Q96B42 140 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 CIB3Q96Q77 187 aaPredicted RBP12.89□□□□□ -0.35
NUP50-201ENST00000347635 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 LPAR6P43657 344 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 TUBG2Q9NRH3 451 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 DNASE2O00115 360 aaPredicted RBP12.89□□□□□ -0.35
NUP50-201ENST00000347635 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
NUP50-201ENST00000347635 ERRFI1Q9UJM3 462 aaPredicted RBP12.89□□□□□ -0.35
NUP50-201ENST00000347635 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 TRDCB7Z8K6 153 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 CDS2O95674 445 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 DLK1P80370 383 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 CLEC12BQ2HXU8 276 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 VASH2Q86V25 355 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 DYRK2Q92630 601 aa12.89□□□□□ -0.35
NUP50-201ENST00000347635 H3BQ15 152 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 CST2P09228 141 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 ACP1P24666 158 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 ZNF718Q3SXZ3 478 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 ELOA3CA0A087WX78 387 aaPredicted RBP12.88□□□□□ -0.35
NUP50-201ENST00000347635 A0A0U1RQV5 110 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms