RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RAB1CQ92928 201 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 SDSLQ96GA7 329 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 NEDD4LQ96PU5 975 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 NUDT16L1Q9BRJ7 211 aaKnown RBP15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 CHST6Q9GZX3 395 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 SHARPINQ9H0F6 387 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 AUNIPQ9H7T9 357 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 CTSZQ9UBR2 303 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 GLS2Q9UI32 602 aa15.84■□□□□ 0.13
CHMP4A-201ENST00000347519 MYO9AB2RTY4 2548 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 TMEM235A6NFC5 223 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 FSTL3O95633 263 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 TALDO1P37837 337 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 OR3A1P47881 315 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 FAM189A2Q15884 450 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PAN3Q58A45 887 aaKnown RBP15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 FAM131AQ6UXB0 335 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 DNM1P46Q6ZS02 220 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PEG10Q86TG7 708 aaKnown RBP15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 SNX29P2Q8IUI4 249 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 C10orf105Q8TEF2 133 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PHF21AQ96BD5 680 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 DPCDQ9BVM2 203 aaPredicted RBP15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 BPESC1Q9GZL8 116 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PPA2Q9H2U2 334 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 NARFLQ9H6Q4 476 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 MYOZ1Q9NP98 299 aaPredicted RBP15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PLEKHJ1Q9NW61 149 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 HSF4Q9ULV5 492 aa15.83■□□□□ 0.12
CHMP4A-201ENST00000347519 PDZD2O15018 2839 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 CEACAM18A8MTB9 384 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 ADAM20O43506 726 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 SCGNO76038 276 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 MNDAP41218 407 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 GUCA2AQ02747 115 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 IL18Q14116 193 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 PLPPR1Q8TBJ4 325 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 TIMD4Q96H15 378 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 HDHD3Q9BSH5 251 aaPredicted RBP15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 ZNF665Q9H7R5 613 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 AK3Q9UIJ7 227 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 CREBBPQ92793 2442 aa15.82■□□□□ 0.12
CHMP4A-201ENST00000347519 IGHV4-30-2A0A087WSY4 118 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 MEIOCA2RUB1 952 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 VWC2LB2RUY7 222 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 SIGLEC5O15389 551 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 SSX5O60225 188 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 RNASE12Q5GAN4 147 aaKnown RBP15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 SPANXN2Q5MJ10 180 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 DCDC5Q6ZRR9 648 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 ASCC1Q8N9N2 400 aaKnown RBP15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 FAM168AQ92567 244 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 NINJ1Q92982 152 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 SDHCQ99643 169 aaPredicted RBP15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 EDARQ9UNE0 448 aa15.81■□□□□ 0.12
CHMP4A-201ENST00000347519 NKX6-3A6NJ46 265 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 MCRIP1C9JLW8 97 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 K7N7A8 449 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 TMPRSS2O15393 492 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 MELTFP08582 738 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 GSTP1P09211 210 aaKnown RBP15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 NR4A2P43354 598 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 ATXN7L3Q14CW9 347 aaPredicted RBP15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 TMEM155Q4W5P6 130 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 PYHIN1Q6K0P9 492 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 CLEC2AQ6UVW9 174 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 Q6ZPA2 131 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 KRTAP1-3Q8IUG1 177 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 LRRC75A-AS1Q8N1F1 130 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 ZNF561Q8N587 486 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 NUDCD2Q8WVJ2 157 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 SNX22Q96L94 193 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 TSC22D3Q99576 134 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 SRRQ9GZT4 340 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 DNTTIP1Q9H147 329 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 SPACA1Q9HBV2 294 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 ING3Q9NXR8 418 aa15.8■□□□□ 0.12
CHMP4A-201ENST00000347519 TK1P04183 234 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 IL13RA1P78552 427 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 DGCR2P98153 550 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 CLEC12BQ2HXU8 276 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 BAIAP2L2Q6UXY1 529 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 MUC20Q8N307 709 aaPredicted RBP15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 TMEM185AQ8NFB2 350 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 COQ2Q96H96 371 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 KAAG1Q9UBP8 84 aa15.79■□□□□ 0.12
CHMP4A-201ENST00000347519 MEIS3P1A6NDR6 274 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 J3QRK9 145 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 NDUFA2O43678 99 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 GLAP06280 429 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 WNT2P09544 360 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 CSF3P09919 207 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 SEC61A1P61619 476 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 GRK1Q15835 563 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 KCNJ8Q15842 424 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 PYDC2Q56P42 97 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 HACD4Q5VWC8 232 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 ZNF841Q6ZN19 808 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms