RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR14A2Q96R54 314 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF184Q99676 751 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 CDCA4Q9BXL8 241 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 ANKRD60Q9BZ19 345 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 PPA2Q9H2U2 334 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 FKBP14Q9NWM8 211 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 FOXJ3Q9UPW0 622 aa12.88□□□□□ -0.35
TSPAN4-201ENST00000346501 CUBNO60494 3623 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 A0A0G2JK05 382 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 GPX5O75715 221 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 IGHV4-59P01825 116 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 CSN2P05814 226 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 IGHV1-8P0DP01 117 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 FSTP19883 344 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 OR3A1P47881 315 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 PAN3Q58A45 887 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 KRBOX4Q5JUW0 171 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 OSR2Q8N2R0 312 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 DTX3Q8N9I9 347 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF565Q8N9K5 539 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 BEND2Q8NDZ0 799 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 OR13C5Q8NGS8 318 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 CCDC90BQ9GZT6 254 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 TBL2Q9Y4P3 447 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
TSPAN4-201ENST00000346501 RGS10O43665 173 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 GPR137BO60478 399 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 CLPXO76031 633 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 ARG1P05089 322 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 GTF2F2P13984 249 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 OR3A4PP47883 348 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 KCNJ3P48549 501 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 RAG2P55895 527 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 AESQ08117 197 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 DOC2BQ14184 412 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 SHISA2Q6UWI4 295 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 CDH26Q8IXH8 852 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 NKAIN3Q8N8D7 197 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 OR4D6Q8NGJ1 314 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 OR51T1Q8NGJ9 327 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 Q9H521 79 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 TCF7L1Q9HCS4 588 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 RAB18Q9NP72 206 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 VPREB3Q9UKI3 123 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 ST3GAL6Q9Y274 331 aa12.86□□□□□ -0.35
TSPAN4-201ENST00000346501 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 ODAMA1E959 279 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 MEX3AA1L020 520 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 CDRT1O95170 752 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 MAS1P04201 325 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 IGFBP3P17936 291 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 SERPINA2P20848 420 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 DLX6P56179 175 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 GPR50Q13585 617 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 ATXN7L3Q14CW9 347 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 AANATQ16613 207 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 LRRC75BQ2VPJ9 315 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 Q6P435 159 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 ASCL4Q6XD76 172 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 OR10K1Q8NGX5 313 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 UFD1Q92890 307 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 SSX3Q99909 188 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
TSPAN4-201ENST00000346501 TRBV5-7A0A0A0MS05 114 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF729A6NN14 1252 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 HSPB6O14558 160 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 NDUFA7O95182 113 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ATP6V1G2O95670 118 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 HSMCR30P0CW71 290 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 OMGP23515 440 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 VHLP40337 213 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 GLIPR1P48060 266 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 SLC35A2P78381 396 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 SLC22A6Q4U2R8 563 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ACSM3Q53FZ2 586 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 RBM48Q5RL73 367 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ASPHD2Q6ICH7 369 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms