RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ZNF25P17030 456 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 RPS4XP62701 263 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF816Q0VGE8 651 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TSPO2Q5TGU0 170 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LANCL3Q6ZV70 420 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 MRPL38Q96DV4 380 aaKnown RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GDF15Q99988 308 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM204Q9BSN7 226 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 NAT8BQ9UHF3 227 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 MASP2O00187 686 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 THY1P04216 161 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CEACAM6P40199 344 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 GNG3P63215 75 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF385CQ66K41 422 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 PARM1Q6UWI2 310 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 CYB561D1Q8N8Q1 229 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 OR1P1Q8NH06 330 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 C11orf94C9JXX5 98 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 DHHO43323 396 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 IGHMP01871 453 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 BGLAPP02818 100 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 PLGLAQ15195 96 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM255AQ5JRV8 349 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 APOBEC3DQ96AK3 386 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LRRC3BQ96PB8 259 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 P4HTMQ9NXG6 502 aa4.22□□□□□ -1.73
CSMD3-203ENST00000343508 LINC01387J3KSC0 135 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 IGKV1D-16P01601 117 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CT45A6P0DMU7 189 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CT45A5P0DMU8 189 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CT45A7P0DMV0 189 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 IL9P15248 144 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 NTF3P20783 257 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CD27P26842 260 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 LPAR6P43657 344 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CYB561P49447 251 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 BPIFB3P59826 476 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CT45A1Q5HYN5 189 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 LINC01590Q5TEZ4 76 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 PRAMEF5Q5TYX0 476 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 PRAMEF6Q5VXH4 476 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 OR5R1Q8NH85 324 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CT45A3Q8NHU0 189 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF775Q96BV0 537 aaPredicted RBP4.21□□□□□ -1.73
CSMD3-203ENST00000343508 TTRP02766 147 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 BCL2P10415 239 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 RRADP55042 308 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 RPS11P62280 158 aaKnown RBP eCLIP4.21□□□□□ -1.73
CSMD3-203ENST00000343508 RAB35Q15286 201 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 HIKESHIQ53FT3 197 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 Q6ZN92 141 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 RPS19BP1Q86WX3 136 aaKnown RBP4.21□□□□□ -1.73
CSMD3-203ENST00000343508 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 IL22RA2Q969J5 263 aa4.21□□□□□ -1.73
CSMD3-203ENST00000343508 CBY3A6NI87 242 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 CHEK1O14757 476 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 OR5I1Q13606 314 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 COL5A1-AS1Q5SY13 56 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 ZAR1Q86SH2 424 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 OR4A4PQ8NGN8 299 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 RHOVQ96L33 236 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GINS3Q9BRX5 216 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 CACNG5Q9UF02 275 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 NPIPB13A6NJU9 1138 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 NPIPB4C9JG80 1138 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 VN1R17PQ8TDU5 208 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 FAM234AQ9H0X4 552 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GNG12Q9UBI6 72 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 LNP1A1A4G5 178 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 CA11O75493 328 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 OR3A1P47881 315 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM196Q5HYL7 178 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 OR13G1Q8NGZ3 307 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 SERGEFQ9UGK8 458 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 SSUH2Q9Y2M2 353 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 OR2W1Q9Y3N9 320 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 IGHV3-15A0A0B4J1V0 119 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 CTGFP29279 349 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 STUMQ69YW2 141 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 C16orf82Q7Z2V1 217 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 C1QL4Q86Z23 238 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 APH1AQ96BI3 265 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 LRRC61Q9BV99 259 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM147Q9BVK8 224 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 LPAR5Q9H1C0 372 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TUBD1Q9UJT1 453 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 PLXNA4Q9HCM2 1894 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 KIAA1549LQ6ZVL6 1849 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 ERHP84090 104 aaKnown RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 FOXF1Q12946 379 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 NUFIP2Q7Z417 695 aaKnown RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 NR2C2APQ86WQ0 139 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 NEIL1Q96FI4 390 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 SPTBP11277 2137 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 MED19A0JLT2 244 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TRGC1P0CF51 173 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms