RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PATJQ8NI35 1801 aa15.77■□□□□ 0.11
SMAD4-201ENST00000342988 GEMIN2O14893 280 aaKnown RBP15.77■□□□□ 0.11
SMAD4-201ENST00000342988 MRPL58Q14197 206 aaKnown RBP15.77■□□□□ 0.11
SMAD4-201ENST00000342988 NOXO1Q8NFA2 376 aa15.77■□□□□ 0.11
SMAD4-201ENST00000342988 RAB33BQ9H082 229 aa15.77■□□□□ 0.11
SMAD4-201ENST00000342988 SERF2P84101 59 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 FAHD2BQ6P2I3 314 aaPredicted RBP15.76■□□□□ 0.11
SMAD4-201ENST00000342988 TM4SF18Q96CE8 201 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 DSCR4P56555 118 aaPredicted RBP15.76■□□□□ 0.11
SMAD4-201ENST00000342988 PSG5Q15238 335 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 OR4B1Q8NGF8 309 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 NGFP01138 241 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 DIO1P49895 249 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 SLC37A1P57057 533 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 OR8B2Q96RD0 313 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 A0A1W2PQM1 296 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 A8MWL6 223 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 DLX6P56179 175 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 GCSAMLQ5JQS6 135 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 FAHD1Q6P587 224 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 RABAC1Q9UI14 185 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 TJP1Q07157 1748 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 HOXA6P31267 233 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 LIMK1P53667 647 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 GABRA1P14867 456 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 RBM45Q8IUH3 476 aaKnown RBP15.76■□□□□ 0.11
SMAD4-201ENST00000342988 OR2C3Q8N628 320 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 MRPL30Q8TCC3 161 aaKnown RBP15.76■□□□□ 0.11
SMAD4-201ENST00000342988 NARFLQ9H6Q4 476 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 CXorf36Q9H7Y0 433 aa15.76■□□□□ 0.11
SMAD4-201ENST00000342988 RELQ04864 619 aaPredicted RBP15.75■□□□□ 0.11
SMAD4-201ENST00000342988 DPH3P1Q9H4G8 78 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 PCOLCE2Q9UKZ9 415 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 FUT9Q9Y231 359 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 LGALSLQ3ZCW2 172 aaPredicted RBP15.75■□□□□ 0.11
SMAD4-201ENST00000342988 TMEM78Q5T7P6 136 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 GPRIN1Q7Z2K8 1008 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 OR13C6PQ8NH95 151 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 WRAP73Q9P2S5 460 aaPredicted RBP15.75■□□□□ 0.11
SMAD4-201ENST00000342988 PPT2Q9UMR5 302 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 IDSB3KWA1 339 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 RPL18Q07020 188 aaKnown RBP15.75■□□□□ 0.11
SMAD4-201ENST00000342988 TNXAQ16473 311 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 TAS1R1Q7RTX1 841 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 ITGB4P16144 1822 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 HMSDA8MTL9 139 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 MDP1Q86V88 176 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 OR2K2Q8NGT1 345 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 WDR34Q96EX3 536 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 DOK1Q99704 481 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 SLC26A1Q9H2B4 701 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 SMDT1Q9H4I9 107 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 LIPFP07098 398 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 KIR2DL4Q99706 377 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 C16orf70Q9BSU1 422 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 MIOXQ9UGB7 285 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 TMEM33P57088 247 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 OR10V1Q8NGI7 309 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 DDB2Q92466 427 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 FBXO17Q96EF6 278 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 OR5AC2Q9NZP5 309 aa15.75■□□□□ 0.11
SMAD4-201ENST00000342988 MBLAC1A4D2B0 266 aaPredicted RBP15.74■□□□□ 0.11
SMAD4-201ENST00000342988 C16orf82Q7Z2V1 217 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 PRNTQ86SH4 94 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 LINC00862A6NCI5 91 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 HCRTO43612 131 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SLC25A17O43808 307 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 MT-ND6P03923 174 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 FGF13Q92913 245 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 RBKSQ9H477 322 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 HPXP02790 462 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SCAND1P57086 179 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 CCDC144NLQ6NUI1 221 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 OR2V2Q96R30 315 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 IER3P46695 156 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 LSM10Q969L4 123 aaKnown RBP15.74■□□□□ 0.11
SMAD4-201ENST00000342988 HAPLN2Q9GZV7 340 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 IGHV3-64DA0A0J9YX35 117 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SPICQ8N5J4 248 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 C16orf92Q96LL3 132 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SPACA5Q96QH8 159 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 M0QZQ0 153 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 B4GALT1P15291 398 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SUMO3P55854 103 aaPredicted RBP15.74■□□□□ 0.11
SMAD4-201ENST00000342988 RPS20P60866 119 aaKnown RBP15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SGMS2Q8NHU3 365 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 LPAR6P43657 344 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 OR3A4PP47883 348 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 OR10AC1Q8NH08 325 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 SH3BGRL3Q9H299 93 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 MMP17Q9ULZ9 603 aa15.74■□□□□ 0.11
SMAD4-201ENST00000342988 TGIF2-C20orf24A0A0A6YYL0 155 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 PYCARD-AS1I3L0S3 204 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 OR10AG1Q8NH19 301 aa15.73■□□□□ 0.11
SMAD4-201ENST00000342988 MVB12AQ96EY5 273 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms