RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ZNF44P15621 663 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 CCKARP32238 428 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 SUPT4H1P63272 117 aaKnown RBP16.96■□□□□ 0.3
RTN1-202ENST00000342503 SLC9A3R2Q15599 337 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 SRSF7Q16629 238 aaKnown RBP eCLIP16.96■□□□□ 0.3
RTN1-202ENST00000342503 LPCAT3Q6P1A2 487 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 CLEC18BQ6UXF7 455 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 RELL2Q8NC24 303 aaPredicted RBP16.96■□□□□ 0.3
RTN1-202ENST00000342503 FXYD6Q9H0Q3 95 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 DECR2Q9NUI1 292 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 ELOVL5Q9NYP7 299 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 SPEF1Q9Y4P9 236 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 PLSCR5A0PG75 271 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 TSC22D2O75157 780 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 NXPH2O95156 264 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 GLAP06280 429 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 CTSDP07339 412 aaPredicted RBP16.95■□□□□ 0.3
RTN1-202ENST00000342503 HLA-GP17693 338 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 FCGR2CP31995 323 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 PRAMEF6Q5VXH4 476 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 C5orf24Q7Z6I8 188 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 LRP11Q86VZ4 500 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 SPERTQ8NA61 448 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 POC1AQ8NBT0 407 aa16.95■□□□□ 0.3
RTN1-202ENST00000342503 DBX1A6NMT0 343 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 KNG1P01042 644 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 ACAA1P09110 424 aaPredicted RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 NKX6-1P78426 367 aaPredicted RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 SRSF4Q08170 494 aaKnown RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 RBM39Q14498 530 aaKnown RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 IGSF11Q5DX21 431 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 ZNF826PQ6ZT77 177 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 MRPL30Q8TCC3 161 aaKnown RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 DHRS9Q9BPW9 319 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 TLNRD1Q9H1K6 362 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 CLEC4MQ9H2X3 399 aaPredicted RBP16.94■□□□□ 0.3
RTN1-202ENST00000342503 JKAMPQ9P055 326 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 PIEZO2Q9H5I5 2752 aa16.94■□□□□ 0.3
RTN1-202ENST00000342503 A0A1B0GWJ7 208 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 SIRPB1O00241 398 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 ZNF250P15622 560 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 RPS2P15880 293 aaKnown RBP16.93■□□□□ 0.3
RTN1-202ENST00000342503 GLRXP35754 106 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 GLP1RP43220 463 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 C1QTNF12Q5T7M4 302 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 GTF3AQ92664 365 aaKnown RBP16.93■□□□□ 0.3
RTN1-202ENST00000342503 TOMM40LQ969M1 308 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 RIMS4Q9H426 269 aaPredicted RBP16.93■□□□□ 0.3
RTN1-202ENST00000342503 PRR13Q9NZ81 148 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 DUSP13Q9UII6 198 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 C16orf97H3BN30 126 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 NOS1APO75052 506 aaPredicted RBP16.93■□□□□ 0.3
RTN1-202ENST00000342503 SLC34A2O95436 690 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 OR2H2O95918 312 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 ZNF728P0DKX0 622 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 SSTR2P30874 369 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 ZNF81P51508 661 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 FXYD4P59646 89 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 ZNF146Q15072 292 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 SEC22AQ96IW7 307 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 PDCD10Q9BUL8 212 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 HES4Q9HCC6 221 aa16.93■□□□□ 0.3
RTN1-202ENST00000342503 TRBV6-6A0A0A6YYG2 114 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 A0A0B4J2A0 478 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 A6NLC8 198 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 FAM25EA8MYX2 175 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 C1QTNF9BB2RNN3 333 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 TRDCB7Z8K6 153 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 ATP6V1G2-DDX39BF2Z307 99 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 SLC33A1O00400 549 aaPredicted RBP16.92■□□□□ 0.3
RTN1-202ENST00000342503 CD8AP01732 235 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 SCTP09683 121 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 C1QTNF9P0C862 333 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 NFYAP23511 347 aaPredicted RBP16.92■□□□□ 0.3
RTN1-202ENST00000342503 SORDQ00796 357 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 ANKRD55Q3KP44 614 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 PAN3Q58A45 887 aaKnown RBP16.92■□□□□ 0.3
RTN1-202ENST00000342503 VHLLQ6RSH7 139 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 C20orf204Q6ZNR8 217 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 SHPKQ9UHJ6 478 aa16.92■□□□□ 0.3
RTN1-202ENST00000342503 TRAV14DV4A0A0A6YYC5 116 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 WNT9BO14905 357 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 IGHV3-13P01766 116 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 CXCL2P19875 107 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 AADACP22760 399 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 SPIN3Q5JUX0 258 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 OR2Z1Q8NG97 314 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 COQ8AQ8NI60 647 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 MOB3AQ96BX8 217 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 UFSP2Q9NUQ7 469 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 ATP23Q9Y6H3 246 aa16.91■□□□□ 0.3
RTN1-202ENST00000342503 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 KIR2DS1A0A191URI9 304 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 SH2D1BO14796 132 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 CD40P25942 277 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 KIR2DS4P43632 304 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 SEC61A1P61619 476 aaKnown RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 MZT1Q08AG7 82 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 KLRB1Q12918 225 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 KIR2DS1Q14954 304 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms