RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF705AQ6ZN79 300 aaPredicted RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 OR52M1Q8NGK5 317 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 OR1K1Q8NGR3 316 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 ABHD3Q8WU67 409 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF488Q96MN9 340 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 COL6A6A6NMZ7 2263 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 TIAF1O95411 115 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 RPL19P84098 196 aaKnown RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 EWSR1Q01844 656 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 EXT1Q16394 746 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 PLPPR5Q32ZL2 321 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 DCAF12Q5T6F0 453 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 D2HGDHQ8N465 521 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 SNX22Q96L94 193 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 DMRTA2Q96SC8 542 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 UTP23Q9BRU9 249 aaKnown RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 OSGIN2Q9Y236 505 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 CLEC18AA5D8T8 446 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 MMP9P14780 707 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 DSCR4P56555 118 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 TAS2R30P59541 319 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 SNAI3Q3KNW1 292 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 CXorf66Q5JRM2 361 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZDHHC23Q8IYP9 409 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 CLEC18CQ8NCF0 446 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 OR10D3Q8NH80 312 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF107Q9UII5 783 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 OR6C6A6NF89 314 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 H3BQ15 152 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 PDGFBP01127 241 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ISG15P05161 165 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 CA6P23280 308 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 SULT1A2P50226 295 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 DLK1P80370 383 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 FHL1Q13642 323 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 VAX1Q5SQQ9 334 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF880Q6PDB4 577 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 PTX4Q96A99 478 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 WNK2Q9Y3S1 2297 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 H0YL77 283 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 MPPED1O15442 326 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF708P17019 499 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 NAAAQ02083 359 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 FAM209BQ5JX69 171 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 PAQR4Q8N4S7 273 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF501Q96CX3 271 aaPredicted RBP10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ADGRG7Q96K78 797 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF319Q9P2F9 582 aa10.86□□□□□ -0.67
SNRNP48-201ENST00000342415 TMEM14DPA8MWL7 114 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF66Q6ZN08 573 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC25A22Q9H936 323 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 CALCRP30988 508 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 CD200P41217 278 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 ERVK-16P61578 105 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 C3AR1Q16581 482 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 OR2M3Q8NG83 312 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 CHST5Q9GZS9 411 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 TMPRSS5Q9H3S3 457 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 A0A0J9YW62 118 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 DEFB108AA8MXU0 73 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF735P0CB33 412 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 FABP6P51161 128 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 RAB35Q15286 201 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 NCR3LG1Q68D85 454 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 FDX2Q6P4F2 183 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF524Q96C55 264 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF251Q9BRH9 671 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 GPR27Q9NS67 375 aa10.85□□□□□ -0.67
SNRNP48-201ENST00000342415 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 DVL1O14640 695 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 GCH1P30793 250 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ERVS71-1P61550 626 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 HTD2P86397 168 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 DHODHQ02127 395 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 PRDX4Q13162 271 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 SPINK14Q6IE38 97 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF343Q6P1L6 599 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 SPEM1Q8N4L4 309 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 TRPM7Q96QT4 1865 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 MYO7BQ6PIF6 2116 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ACKR3P25106 362 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 FKBP2P26885 142 aaKnown RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 IGLV3-21P80748 117 aaPredicted RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 CATR1Q13166 79 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 AQP7P3A6NL99 342 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 TRAF3IP2O43734 574 aaPredicted RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 FCGR3AP08637 254 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms