RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 A8MXE2 369 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 CRYZL1O95825 349 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 MMP16P51512 607 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 RALYQ9UKM9 306 aaKnown RBP11.09□□□□□ -0.63
LIN54-201ENST00000340417 TMEM127O75204 238 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 TXNDC12O95881 172 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 RAB4BP61018 213 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 A0A0G2JNJ9 132 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 F6UZH7 168 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.63
LIN54-201ENST00000340417 LPAR6P43657 344 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 MVDP53602 400 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 OR5R1Q8NH85 324 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.63
LIN54-201ENST00000340417 OR5B12Q96R08 314 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 Q9UFV3 132 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 CYB5R1Q9UHQ9 305 aa11.08□□□□□ -0.63
LIN54-201ENST00000340417 DSPPQ9NZW4 1301 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 XRCC3O43542 346 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 S100A6P06703 90 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 FGF2P09038 288 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 SORDQ00796 357 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 RBFOX1Q9NWB1 397 aaKnown RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 TAS2R3Q9NYW6 316 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 ST8SIA3O43173 380 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 PRB1P04280 392 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 FOXF2Q12947 444 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 RHEBQ15382 184 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 ZNF770Q6IQ21 691 aaPredicted RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 OPN1MWP04001 364 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 OPN1MW2P0DN77 364 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 OPN1MW3P0DN78 364 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 TPT1P13693 172 aaKnown RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 JUNBP17275 347 aaPredicted RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 GZMMP51124 257 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 TEX30Q5JUR7 227 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 MARCH1Q8TCQ1 289 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
LIN54-201ENST00000340417 RNF24Q9Y225 148 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 TOX4O94842 621 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 GZMKP49863 264 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 DGCR2P98153 550 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 TPRX1Q8N7U7 411 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 RAB18Q9NP72 206 aa11.08□□□□□ -0.64
LIN54-201ENST00000340417 A0A1W2PPE3 182 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 LEUTXA8MZ59 168 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 THBDP07204 575 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 LIMS3P0CW19 117 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 LIMS4P0CW20 117 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 ZNF788Q6ZQV5 615 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 OR52L2PQ8NGH6 319 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 SNX22Q96L94 193 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 PRDM14Q9GZV8 571 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 ARHGEF17Q96PE2 2063 aaPredicted RBP11.07□□□□□ -0.64
LIN54-201ENST00000340417 DFFBO76075 338 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 SPDEFO95238 335 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 CENPVQ7Z7K6 275 aaPredicted RBP11.07□□□□□ -0.64
LIN54-201ENST00000340417 OR4S1Q8NGB4 309 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 PECRQ9BY49 303 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 K7N7A8 449 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 LANCL1O43813 399 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 SSSCA1O60232 199 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 OR2F2O95006 317 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 CD3DP04234 171 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 MST1P26927 711 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 TMPRSS13Q9BYE2 586 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 C20orf85Q9H1P6 137 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 CA11O75493 328 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 ADRA2CP18825 462 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 SCMH1Q96GD3 660 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 TRAV39A0A0B4J263 110 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 GP2P55259 537 aaKnown RBP11.07□□□□□ -0.64
LIN54-201ENST00000340417 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 RPUSD3Q6P087 351 aaKnown RBP11.07□□□□□ -0.64
LIN54-201ENST00000340417 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 GPX7Q96SL4 187 aaPredicted RBP11.07□□□□□ -0.64
LIN54-201ENST00000340417 NMES1Q9C002 83 aa11.07□□□□□ -0.64
LIN54-201ENST00000340417 J3QW42 95 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 IGF2P01344 180 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 LHX4Q969G2 390 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 GPA33Q99795 319 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 RNF122Q9H9V4 155 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 UBQLN2Q9UHD9 624 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 ACKR3P25106 362 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 SNAI3Q3KNW1 292 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 LILRB4Q8NHJ6 448 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 TMEM208Q9BTX3 173 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 AUP1Q9Y679 476 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms