RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 RBM39Q14498 530 aaKnown RBP12.98□□□□□ -0.33
H3F3C-201ENST00000340398 HLA-DRB5Q30154 266 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 KRBOX4Q5JUW0 171 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 LINC00482Q8N8I6 264 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 RCC1LQ96I51 464 aaKnown RBP12.98□□□□□ -0.33
H3F3C-201ENST00000340398 OPALINQ96PE5 141 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 GABARAPL1Q9H0R8 117 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
H3F3C-201ENST00000340398 SLC33A1O00400 549 aaPredicted RBP12.97□□□□□ -0.33
H3F3C-201ENST00000340398 KDM4BO94953 1096 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 NFYBP25208 207 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 PRRX1P54821 245 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 FAM220AQ7Z4H9 259 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 LEAP2Q969E1 77 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 MBOAT4Q96T53 435 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 COMMD4Q9H0A8 199 aa12.97□□□□□ -0.33
H3F3C-201ENST00000340398 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
H3F3C-201ENST00000340398 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 DEGS1O15121 323 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 ISG15P05161 165 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 OCM2P0CE71 109 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 OCMP0CE72 109 aaPredicted RBP12.96□□□□□ -0.33
H3F3C-201ENST00000340398 CEACAM3P40198 252 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 PTGFRP43088 359 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 ARHGDIBP52566 201 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 DIAPH2-AS1Q14236 149 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 ATXN7L3Q14CW9 347 aaPredicted RBP12.96□□□□□ -0.33
H3F3C-201ENST00000340398 CDK5R1Q15078 307 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 ETV3LQ6ZN32 361 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 MRPL41Q8IXM3 137 aaKnown RBP12.96□□□□□ -0.33
H3F3C-201ENST00000340398 OSR2Q8N2R0 312 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 SPSB1Q96BD6 273 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 HRASLS5Q96KN8 279 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.33
H3F3C-201ENST00000340398 NEK6Q9HC98 313 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
H3F3C-201ENST00000340398 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
H3F3C-201ENST00000340398 PSMB11A5LHX3 300 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A18PA6NE21 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A16PA6NEW6 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A20PA6NIJ5 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A12PA8MX19 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A5PA8MXJ8 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 J3QLW9 94 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 J3QRE1 110 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 HSPB6O14558 160 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A15PP0C7V4 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A13PP0C7W8 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A14PP0C7W9 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FAM90A24PP0C7X0 464 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 CGB3P0DN86 165 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 CGB7P0DN87 165 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 ZNF19P17023 458 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 EGFEM1PQ0D2K5 195 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 TMED1Q13445 227 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 HNF4GQ14541 408 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 FDX2Q6P4F2 183 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 OR13C3Q8NGS6 347 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 RFKQ969G6 155 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
H3F3C-201ENST00000340398 ZNF649Q9BS31 505 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 AASSQ9UDR5 926 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 ENOPH1Q9UHY7 261 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 OAZ3Q9UMX2 235 aa12.95□□□□□ -0.34
H3F3C-201ENST00000340398 TENM3Q9P273 2699 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 A0A087X0M5 115 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 KBTBD11-OT1A0A1B0GTJ5 212 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 A0A1B0GX30 115 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 DAPL1A0PJW8 107 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 OR4C45A6NMZ5 311 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 ZNF729A6NN14 1252 aaPredicted RBP12.94□□□□□ -0.34
H3F3C-201ENST00000340398 SLC16A6O15403 523 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 DUS4LO95620 317 aaKnown RBP12.94□□□□□ -0.34
H3F3C-201ENST00000340398 CLIC3O95833 236 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 SNRNP70P08621 437 aaKnown RBP12.94□□□□□ -0.34
H3F3C-201ENST00000340398 HTR1AP08908 422 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 FAM106CPP0CH98 169 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 TMEM225BP0DP42 221 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 MNDAP41218 407 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 LTC4SQ16873 150 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 OR56B4Q8NH76 319 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 CREB3L1Q96BA8 519 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 RNFT2Q96EX2 444 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 OSBPL10Q9BXB5 764 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 ZCCHC4Q9H5U6 513 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 MYRFQ9Y2G1 1151 aa12.94□□□□□ -0.34
H3F3C-201ENST00000340398 SAC3D1A6NKF1 404 aa12.93□□□□□ -0.34
H3F3C-201ENST00000340398 J3QR06 171 aa12.93□□□□□ -0.34
H3F3C-201ENST00000340398 MT-ND2P03891 347 aa12.93□□□□□ -0.34
H3F3C-201ENST00000340398 CSN2P05814 226 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms