RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ANGPTL6Q8NI99 470 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 GTF3AQ92664 365 aaKnown RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 OR5AC2Q9NZP5 309 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 TP53TG5Q9Y2B4 290 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 KCNIP3Q9Y2W7 256 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 COL27A1Q8IZC6 1860 aaPredicted RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ANKHD1Q8IWZ3 2542 aaKnown RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 MKRN2OSH3BPM6 223 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 SPRY3O43610 288 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 SFT2D2O95562 160 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 TK1P04183 234 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF250P15622 560 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 SMCO1Q147U7 214 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ACSF3Q4G176 576 aaPredicted RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 LYZL2Q7Z4W2 148 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 FAM89BQ8N5H3 189 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 SUMF2Q8NBJ7 301 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 HEXA-AS1Q9H8Q6 139 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 PPP1R3CQ9UQK1 317 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 IGHV3-43A0A0B4J1X8 118 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 RFPL4AA6NLU0 287 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 RFPL4AL1F8VTS6 287 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 MSTNO14793 375 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 NUPL2O15504 423 aaKnown RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 SMPD2O60906 423 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 OR2A4O95047 310 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 IGHV3-43DP0DP04 118 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 PSMB6P28072 239 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 UCP2P55851 309 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 PSG7Q13046 419 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF573Q86YE8 665 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 WFDC8Q8IUA0 241 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 C10orf35Q96D05 121 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 OR2A7Q96R45 310 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 RTL8AQ9BWD3 113 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 FAM234AQ9H0X4 552 aa8.7□□□□□ -1.02
RBFOX1-202ENST00000340209 DEFB108AA8MXU0 73 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 CECR9P0C854 216 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 FAM27E3Q08E93 113 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 FAM53AQ6NSI3 398 aaPredicted RBP8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 KLF14Q8TD94 323 aaPredicted RBP8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 SSC4DQ8WTU2 575 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 NTNG2Q96CW9 530 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 ASF1BQ9NVP2 202 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 ITGB1BP2Q9UKP3 347 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 IGHV3OR15-7A0A075B7D8 119 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 ALX3O95076 343 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 TBPP20226 339 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 SUPT4H1P63272 117 aaKnown RBP8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 PPA1Q15181 289 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 TM2D1Q9BX74 207 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF391Q9UJN7 358 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 DOCK11Q5JSL3 2073 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 MAP1AP78559 2803 aaPredicted RBP8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 MSGN1A6NI15 193 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 LRP3O75074 770 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 GABRA6Q16445 453 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 FAM201AQ5SY85 155 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM268Q5VZI3 342 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 SLC2A9Q9NRM0 540 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 CLCF1Q9UBD9 225 aa8.69□□□□□ -1.02
RBFOX1-202ENST00000340209 CACNA1BQ00975 2339 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 PQLC2LA1A4F0 135 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 H3BP45 60 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 CAV2P51636 162 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 FGL1Q08830 312 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF154Q13106 437 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 Q6ZT83 130 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 LRP11Q86VZ4 500 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 LRRC20Q8TCA0 184 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 S100PBPQ96BU1 408 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 GSX2Q9BZM3 304 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 CCL28Q9NRJ3 127 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 DNAJB11Q9UBS4 358 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 OSGIN2Q9Y236 505 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 ACACBO00763 2458 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 TPPPO94811 219 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 RRASP10301 218 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 BHLHA15Q7RTS1 189 aaPredicted RBP8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 OR5P3Q8WZ94 311 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 FBLN5Q9UBX5 448 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 RPL36A-HNRNPH2H7BZ11 118 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 RBMXL2O75526 392 aaKnown RBP8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 TUSC2O75896 110 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 CRHP06850 196 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 GGNBP1Q5YKI7 109 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM42Q69YG0 159 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 C20orf204Q6ZNR8 217 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 OR10V1Q8NGI7 309 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 MUCL1Q96DR8 90 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms