RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 CRYABP02511 175 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 RAC2P15153 192 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PHLDA2Q53GA4 152 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PRAMEF6Q5VXH4 476 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF573Q86YE8 665 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 C11orf53Q8IXP5 236 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM58AQ8N1B3 248 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF680Q8NEM1 530 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM57AQ8TBR7 257 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 OR10C1Q96KK4 312 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PDCD10Q9BUL8 212 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 C12orf4Q9NQ89 552 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 RDH8Q9NYR8 311 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 MSRB2Q9Y3D2 182 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 A0A0G2JNJ9 132 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SIRPB1O00241 398 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 HOXB5P09067 269 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 FPR2P25090 351 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SERPINF1P36955 418 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SEC61A1P61619 476 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DHODHQ02127 395 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 P2RY6Q15077 328 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 C6orf183Q5T699 404 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM53AQ6NSI3 398 aaPredicted RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DHRS11Q6UWP2 260 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 BEND4Q6ZU67 534 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 CCDC36Q8IYA8 594 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 TMEM185AQ8NFB2 350 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5T2Q8NGG2 359 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PHB2Q99623 299 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 CHMP1AQ9HD42 196 aaPredicted RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 Q9UFV3 132 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PURGQ9UJV8 347 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 CSMD1Q96PZ7 3565 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 SPTAN1Q13813 2472 aaKnown RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 C5orf51A6NDU8 294 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OR5B21A6NL26 309 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 IQCF6A8MYZ5 107 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 CA11O75493 328 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 NAPSAO96009 420 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF44P15621 663 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 AADACP22760 399 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 DTYMKP23919 212 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 CCKARP32238 428 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 TIMP3P35625 211 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 NAAAQ02083 359 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 IL24Q13007 206 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 ZMYND11Q15326 602 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OR8G1Q15617 311 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 ACTBL2Q562R1 376 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 LDLRAD3Q86YD5 345 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 PRR18Q8N4B5 295 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OPA3Q9H6K4 179 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OR14J1Q9UGF5 321 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 A8MXE2 369 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 TIMM8AO60220 97 aaPredicted RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 PSPNO60542 156 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 CEACAM8P31997 349 aaPredicted RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 PIGPP57054 158 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OPCMLQ14982 345 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 ARL6IP1Q15041 203 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 KRTCAP3Q53RY4 240 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 Q6P435 159 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 GFRALQ6UXV0 394 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 SAXO1Q8IYX7 474 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OR8H3Q8N146 312 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 OR8G5Q8NG78 346 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 USB1Q9BQ65 265 aaKnown RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 ARL6Q9H0F7 186 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 TMEM100Q9NV29 134 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 NECAP2Q9NVZ3 263 aa6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 RCC2Q9P258 522 aaKnown RBP6.27□□□□□ -1.41
SRFBP1-201ENST00000339397 VPS13CQ709C8 3753 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 IGKV1D-13A0A0B4J2D9 117 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 H0YIZ8 118 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 J3QT63 122 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 L7N2F9 121 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 RRP8O43159 456 aaKnown RBP6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 SFT2D2O95562 160 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 OR2H2O95918 312 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 IGKV1-13P0DP09 117 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 ERVK11-1P61568 191 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 EXOSC2Q13868 293 aaKnown RBP6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 PPA1Q15181 289 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 TMEM211Q6ICI0 200 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 FAHD2BQ6P2I3 314 aaPredicted RBP6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF546Q86UE3 836 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 PLPPR1Q8TBJ4 325 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 FAHD2AQ96GK7 314 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 SYT3Q9BQG1 590 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 RTL8AQ9BWD3 113 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF286AQ9HBT8 521 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 Q9N2K0 584 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 TREM2Q9NZC2 230 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 EDARQ9UNE0 448 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 A6NLC8 198 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms