RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SNRPGP62308 76 aaKnown RBP8.56□□□□□ -1.04
CAPN3-202ENST00000337571 ZIK1Q3SY52 487 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-202ENST00000337571 KRBOX4Q5JUW0 171 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 SLC25A30Q5SVS4 291 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 KPRPQ5T749 579 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-202ENST00000337571 PRAMEF5Q5TYX0 476 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 HEPN1Q6WQI6 88 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 TCF23Q7RTU1 214 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 SERPINA12Q8IW75 414 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 C10orf67Q8IYJ2 551 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 SAXO1Q8IYX7 474 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF565Q8N9K5 539 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 CHST4Q8NCG5 386 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 OR5D18Q8NGL1 313 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 OR5D14Q8NGL3 314 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 OR13C9Q8NGT0 318 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 CORO2AQ92828 525 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 Q96MT0 163 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 WNT10AQ9GZT5 417 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 ZCCHC4Q9H5U6 513 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 ING3Q9NXR8 418 aa8.56□□□□□ -1.04
CAPN3-202ENST00000337571 A0A1W2PRX2 142 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 TCRBV4S1A1TA0A5B7 111 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 FAM90A22PA8MWA6 464 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 PIN1P1O15428 100 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 MT-ND2P03891 347 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 ALPLP05186 524 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 CD24P25063 80 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 LMO1P25800 156 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 PTGFRP43088 359 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 GLIPR1P48060 266 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 NANOS3P60323 173 aaKnown RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 BDH1Q02338 343 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 ALKBH1Q13686 389 aaKnown RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 CCDC144NLQ6NUI1 221 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 Q6ZS46 218 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 LHFPL3Q86UP9 236 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 OR4P4Q8NGL7 312 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 PYDC1Q8WXC3 89 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 CPNE2Q96FN4 548 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 C4orf36Q96KX1 117 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 SPACA5Q96QH8 159 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 COMMD4Q9H0A8 199 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 NECAP2Q9NVZ3 263 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 OR6C3Q9NZP0 311 aa8.55□□□□□ -1.04
CAPN3-202ENST00000337571 EXOGQ9Y2C4 368 aaKnown RBP8.55□□□□□ -1.04
CAPN3-202ENST00000337571 PRKDCP78527 4128 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ODAMA1E959 279 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 FAM172BPA6NC97 362 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 J3QRE1 110 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 M0QZK8 103 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 EI24O14681 340 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 MPZL2O60487 215 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 MMP23AO75900 390 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 KDM4BO94953 1096 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 FADS2O95864 444 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 FAM106CPP0CH98 169 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 DBTP11182 482 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 NFYBP25208 207 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 C21orf33P30042 268 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ALDH3A2P51648 485 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 GBX2P52951 348 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 MRPL28Q13084 256 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 GALEQ14376 348 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 RBM39Q14498 530 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 KISS1Q15726 138 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ABCA11PQ4W5N1 156 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 C9orf152Q5JTZ5 239 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ZFP1Q6P2D0 407 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 SATL1Q86VE3 508 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 OR4X2Q8NGF9 303 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 OR51A4Q8NGJ6 313 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 OR5AK2Q8NH90 309 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 MRAPQ8TCY5 172 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 TSEN15Q8WW01 171 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 PELI1Q96FA3 418 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 RBM14Q96PK6 669 aaKnown RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 NR1H4Q96RI1 486 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-202ENST00000337571 GPER1Q99527 375 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 SLC25A33Q9BSK2 321 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 ALG8Q9BVK2 526 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 BARHL1Q9BZE3 327 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 DHDHQ9UQ10 334 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 GMPPBQ9Y5P6 360 aa8.54□□□□□ -1.04
CAPN3-202ENST00000337571 IGKV1-12A0A0C4DH73 117 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 TMEM212A6NML5 194 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 OR4C45A6NMZ5 311 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 OOSP1A8MZH6 123 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 BUB1B-PAK6H3BSN5 160 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 SLC33A1O00400 549 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-202ENST00000337571 SULT1B1O43704 296 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 OR2F2O95006 317 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 ALX3O95076 343 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 CLIC3O95833 236 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 IGKV1D-12P01611 117 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 IGLV1-47P01700 117 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms