RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 DAZAP1Q96EP5 407 aaKnown RBP14.19□□□□□ -0.14
NPHP3-201ENST00000337331 ARHGAP5-AS1Q96IT6 56 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 TMEM9BQ9NQ34 198 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 NAGKQ9UJ70 344 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 SIRPB1O00241 398 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 SEC11BP0C7V7 166 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 FAM3AP98173 230 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 CD226Q15762 336 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 Q5PR19 223 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 OIT3Q8WWZ8 545 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 LHX4Q969G2 390 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 HIST1H2BLQ99880 126 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 POLDIP2Q9Y2S7 368 aa14.19□□□□□ -0.14
NPHP3-201ENST00000337331 RAB7AP51149 207 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 TDHQ8IZJ6 230 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 OSR2Q8N2R0 312 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 ONECUT2O95948 504 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 GPR3P46089 330 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 MESP2Q0VG99 397 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 PDCD1Q15116 288 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 MPV17LQ2QL34 196 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 DEGS2Q6QHC5 323 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 MRGPREQ86SM8 312 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 LRP5LA4QPB2 252 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 AQP7P3A6NL99 342 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 OR4C45A6NMZ5 311 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 IGHV2-5P01817 119 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 KISS1Q15726 138 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 PNLIPRP3Q17RR3 467 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 PRAMEF5Q5TYX0 476 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 PRAMEF6Q5VXH4 476 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 UNQ6494/PRO21346Q6UXR6 183 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 ZNF664Q8N3J9 261 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 OR4F5Q8NH21 305 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 OR4F4Q96R69 305 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 LNP1A1A4G5 178 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 C9JQL5 133 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 HLA-DOBP13765 273 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 FPR2P25090 351 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 CHRNB4P30926 498 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 INSM1Q01101 510 aaPredicted RBP14.18□□□□□ -0.14
NPHP3-201ENST00000337331 TMPRSS7Q7RTY8 843 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 BIVMQ86UB2 503 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 LRRC3BQ96PB8 259 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 AQP10Q96PS8 301 aa14.18□□□□□ -0.14
NPHP3-201ENST00000337331 HSBP1L1C9JCN9 74 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 H3BMH7 237 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 HOXC4P09017 264 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 NPSP0C0P6 89 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 JOSD1Q15040 202 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 Q7L0L9 218 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 OR52N4Q8NGI2 321 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 OR2AE1Q8NHA4 323 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 LYRM2Q9NU23 88 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 BET1LQ9NYM9 111 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 EP300Q09472 2414 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 HRKO00198 91 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 ENSAO43768 121 aaKnown RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 TTRP02766 147 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 CHRNA7P36544 502 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 FGF8P55075 233 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 ZNF573Q86YE8 665 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 NPEPL1Q8NDH3 523 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 MCHR2Q969V1 340 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 VSTM2LQ96N03 204 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 SLC2A8Q9NY64 477 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 TMEM183AQ8IXX5 376 aa14.17□□□□□ -0.14
NPHP3-201ENST00000337331 APOBEC4Q8WW27 367 aaKnown RBP14.17□□□□□ -0.14
NPHP3-201ENST00000337331 LDLRAD4O15165 306 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 CD5P06127 495 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 IAPPP10997 89 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 HIST1H1DP16402 221 aaKnown RBP14.16□□□□□ -0.14
NPHP3-201ENST00000337331 THBS4P35443 961 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 CCL7P80098 99 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 OR8B8Q15620 311 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 HKR1P10072 659 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 BTNL3Q6UXE8 466 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 KISS1RQ969F8 398 aaPredicted RBP14.16□□□□□ -0.14
NPHP3-201ENST00000337331 ATP5SQ99766 215 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 FOXB1Q99853 325 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 FIGNL2A6NMB9 653 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 CYB5R3P00387 301 aaPredicted RBP14.16□□□□□ -0.14
NPHP3-201ENST00000337331 OR5AC1P0C628 307 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 BTNL8Q6UX41 500 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 VASH2Q86V25 355 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 C20orf196Q8IYI0 205 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 OR5C1Q8NGR4 320 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 CMTM2Q8TAZ6 248 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 SLC26A1Q9H2B4 701 aa14.16□□□□□ -0.14
NPHP3-201ENST00000337331 ZNF816-ZNF321PA0A0X1KG74 233 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 RND3P61587 244 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 MRPL24Q96A35 216 aaKnown RBP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 PRDM13Q9H4Q3 707 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 SDK2Q58EX2 2172 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 CENPVL1A0A0U1RR11 272 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 CXCL1P09341 107 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 GABRA4P48169 554 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 TNFSF10P50591 281 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms