RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CXCL12P48061 93 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF133P52736 654 aaPredicted RBP14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 RPUSD3Q6P087 351 aaKnown RBP14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF610Q8N9Z0 462 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 C9orf135Q5VTT2 229 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 C5orf24Q7Z6I8 188 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 GPR137CQ8N3F9 429 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 SNX22Q96L94 193 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
CDC42EP4-201ENST00000335793 CUL9Q8IWT3 2517 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 SEC14L6B5MCN3 397 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 HSPB6O14558 160 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 SLC25A53Q5H9E4 307 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 RTL6Q6ICC9 239 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 CHCHD2Q9Y6H1 151 aaPredicted RBP14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 NXPH3O95157 252 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 RPS2P15880 293 aaKnown RBP14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 CCL1P22362 96 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 SULT1A2P50226 295 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 VHLLQ6RSH7 139 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 OR11L1Q8NGX0 322 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 NDUFAF3Q9BU61 184 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 SLC7A11Q9UPY5 501 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 KPTNQ9Y664 436 aa14.36□□□□□ -0.11
CDC42EP4-201ENST00000335793 C9J4A7 227 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 CTSDP07339 412 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 GNMTQ14749 295 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 PLCXD3Q63HM9 321 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 ADPRHL1Q8NDY3 354 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 FAM213BQ8TBF2 198 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 SMIM8Q96KF7 97 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 SYT3Q9BQG1 590 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 TIMM10BQ9Y5J6 103 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 TGIF2-C20orf24A0A0A6YYL0 155 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 A0A0J9YW62 118 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 TOX3O15405 576 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 DLEU1O43261 78 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 DEDDO75618 318 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 NRASP01111 189 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 SSR4P51571 173 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 CNN3Q15417 329 aaKnown RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 LBHQ53QV2 105 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 FAM180AQ6UWF9 173 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 RPS19BP1Q86WX3 136 aaKnown RBP14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 NTNG2Q96CW9 530 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 LUZP4Q9P127 313 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 DOCK7Q96N67 2140 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 EML6Q6ZMW3 1958 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 A0A0U1RQV5 110 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 CA11O75493 328 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 VAMP5O95183 116 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 RAB4AP20338 218 aa14.35□□□□□ -0.11
CDC42EP4-201ENST00000335793 CPAMD8Q8IZJ3 1885 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 FRYLO94915 3013 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 E5RGE8 158 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF32P17041 273 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 HIST3H2BBQ8N257 126 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 DUSP23Q9BVJ7 150 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 KCNJ16Q9NPI9 418 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 NSG2Q9Y328 171 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 UBE2J1Q9Y385 318 aaPredicted RBP14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 CEACAM18A8MTB9 384 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 CXCL1P09341 107 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 SPINK2P20155 84 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 NOVA1P51513 510 aaKnown RBP14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 SPEM2Q0P670 501 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 MALLQ13021 153 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 TMEM182Q6ZP80 229 aaPredicted RBP14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 AAED1Q7RTV5 226 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 SLC16A14Q7RTX9 510 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 PCED1AQ9H1Q7 454 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 ASCL3Q9NQ33 180 aa14.34□□□□□ -0.11
CDC42EP4-201ENST00000335793 NSG1A0A0A6YYJ2 146 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 ECI1P42126 302 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 RPS23P62266 143 aaKnown RBP14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 KCNMB1Q16558 191 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 GUK1Q16774 197 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 CLEC2AQ6UVW9 174 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF705AQ6ZN79 300 aaPredicted RBP14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 C17orf78Q8N4C9 275 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 Q96M66 194 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 NAA60Q9H7X0 242 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 ZNF286AQ9HBT8 521 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 SEMA5BQ9P283 1151 aa14.33□□□□□ -0.11
CDC42EP4-201ENST00000335793 CRYM-AS1A6NIL9 109 aa14.33□□□□□ -0.12
CDC42EP4-201ENST00000335793 ST8SIA3O43173 380 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms