RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 HHLA1C9JL84 531 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 SLC17A2O00624 439 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 CATP04040 527 aaKnown RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 BCL2P10415 239 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 CSRP1P21291 193 aaKnown RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 RBMXP38159 391 aaKnown RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 BUD31P41223 144 aaPredicted RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 SLC6A12P48065 614 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 SPEM2Q0P670 501 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 BVES-AS1Q5T3Y7 98 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 TRAT1Q6PIZ9 186 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 RPS4Y2Q8TD47 263 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 NINJ1Q92982 152 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 GPR82Q96P67 336 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ATP5SQ99766 215 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 SMIM7Q9BQ49 75 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 NPVFQ9HCQ7 196 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 FBXL7Q9UJT9 491 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ZNF214Q9UL59 606 aaPredicted RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 TRAV25A0A0B4J276 109 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 hCG_38984A0A1B0GV85 526 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 CLDN6P56747 220 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 HIST1H1AQ02539 215 aaPredicted RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 PLCXD2Q0VAA5 305 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 GAB4Q2WGN9 574 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 MPV17L2Q567V2 206 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 DTWD2Q8NBA8 298 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 PLD4Q96BZ4 506 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ADOQ96SZ5 270 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ZDHHC11Q9H8X9 412 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 KLK13Q9UKR3 277 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 BOKQ9UMX3 212 aaPredicted RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 GPR132Q9UNW8 380 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 MED19A0JLT2 244 aaPredicted RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 PSMB11A5LHX3 300 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 K7EP34 96 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 KLF4O43474 513 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 SERF1AO75920 110 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 OPRM1P35372 400 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 PDE7AQ13946 482 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 HLA-BQ31612 363 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ZNF585BQ52M93 769 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 AMZ2Q86W34 360 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 PIANPQ8IYJ0 282 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 OR2L13Q8N349 312 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 FGF13Q92913 245 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 RAB8BQ92930 207 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 CAPNS2Q96L46 248 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 GNG13Q9P2W3 67 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 CCNL1Q9UK58 526 aaPredicted RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 TRAV8-7A0A075B6U6 113 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TNFRSF10CO14798 259 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ABHD16AO95870 558 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 NUDT3O95989 172 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TGFAP01135 160 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 HBZP02008 142 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 PIRTP0C851 137 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ATP6V0CP27449 155 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 SRD5A2P31213 254 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 CDKN2AP42771 156 aaKnown RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 SOX2P48431 317 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 RAE1P78406 368 aaKnown RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 EGR4Q05215 589 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 HFE2Q6ZVN8 426 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 Q7L0L9 218 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 SULF2Q8IWU5 870 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 LGI3Q8N145 548 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 Q8N976 141 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 GLMPQ8WWB7 406 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TRAV38-1A0A0B4J264 116 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 RHOQP17081 205 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 AADACP22760 399 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 PPP1CBP62140 327 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TRAPPC6BQ86SZ2 158 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 TMEM123Q8N131 208 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 LINC00615Q96LM1 132 aaPredicted RBP7.51□□□□□ -1.21
TDP1-201ENST00000335725 MAGEH1Q9H213 219 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ZNF160Q9HCG1 818 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 NEUROD4Q9HD90 331 aa7.51□□□□□ -1.21
TDP1-201ENST00000335725 ZNF106Q9H2Y7 1883 aaKnown RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 TRBV5-5A0A0J9YX44 114 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 GPX1P07203 203 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 HRH1P35367 487 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 YPEL5P62699 121 aa7.5□□□□□ -1.21
TDP1-201ENST00000335725 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
TDP1-201ENST00000335725 Q0VG73 95 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms