RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 EML6Q6ZMW3 1958 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 AMY1AP04745 511 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CLDN2P57739 230 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 PFN3P60673 137 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 BTLAQ7Z6A9 289 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 C20orf196Q8IYI0 205 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 C1QTNF6Q9BXI9 259 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 PQLC2LA1A4F0 135 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FAM221AA4D161 298 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 H3BMH7 237 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HBZP02008 142 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CCR5P51681 352 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 YPEL5P62699 121 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SOX4Q06945 474 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MPV17LQ2QL34 196 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MRGPRX4Q96LA9 322 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 A4GNTQ9UNA3 340 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HS3ST2Q9Y278 367 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HMX2A2RU54 273 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CDK2AP1O14519 115 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RBFOX2O43251 390 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 FCMRO60667 390 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SEMG1P04279 462 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 DAOP14920 347 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CCL14Q16627 93 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 H1FOOQ8IZA3 346 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 RHBDD1Q8TEB9 315 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF775Q96BV0 537 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ARHGAP5-AS1Q96IT6 56 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 ANAPC13Q9BS18 74 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CLDN16Q9Y5I7 305 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 POU2F2P09086 479 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 GNG10P50151 68 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 LYZP61626 148 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM215Q68D42 235 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 TP53INP2Q8IXH6 220 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CYB561D1Q8N8Q1 229 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 BCL2L10Q9HD36 194 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 SYNGR2O43760 224 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 CTSDP07339 412 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MMP16P51512 607 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 MRPL58Q14197 206 aaKnown RBP5.52□□□□□ -1.53
CSMD1-201ENST00000335551 NHLRC1Q6VVB1 395 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 VSTM2AQ8TAG5 236 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 PPT2Q9UMR5 302 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 NEU3Q9UQ49 428 aa5.52□□□□□ -1.53
CSMD1-201ENST00000335551 COL2A1P02458 1487 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 PLPP2O43688 288 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CYB5R3P00387 301 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SELENOPP49908 381 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 PCBP3P57721 371 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NIT1Q86X76 327 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 UBALD2Q8IYN6 164 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 FBXL14Q8N1E6 418 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 RAB33BQ9H082 229 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 AMMECR1Q9Y4X0 333 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 TGIF2LYQ8IUE0 185 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 FGF14Q92915 247 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 IER2Q9BTL4 223 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 GAMTQ14353 236 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF260Q3ZCT1 412 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LRRTM3Q86VH5 581 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM25Q86YD3 366 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 ETFBKMTQ8IXQ9 262 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 MUC15Q8N387 334 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 HDGFL3Q9Y3E1 203 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 GNB2P62879 340 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SLC35B1P78383 322 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NUDT10Q8NFP7 164 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NUDT11Q96G61 164 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 FER1L6-AS2Q96M78 137 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LRP12Q9Y561 859 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 K7ESF4 209 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 B4GALT1P15291 398 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CEACAM6P40199 344 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CDKN2AP42771 156 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SUMO3P55854 103 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 GUCA2AQ02747 115 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 BATF2Q8N1L9 274 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF346Q9UL40 294 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 A0A0B4J293 547 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 A8MWL6 223 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SLC25A17O43808 307 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SFTPCP11686 197 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 GPR3P46089 330 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NKAIN4Q8IVV8 208 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 OR1F12Q8NHA8 337 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 FBXO17Q96EF6 278 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 IP6K3Q96PC2 410 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1B0GU03 582 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 PLPP1O14494 284 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CEBPBP17676 345 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM65Q6PI78 240 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 HTR3DQ70Z44 454 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms