RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 FAM90A18PA6NE21 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A16PA6NEW6 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A20PA6NIJ5 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A8PA6NJQ4 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A7PA6NKC0 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A22PA8MWA6 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A12PA8MX19 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A5PA8MXJ8 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A23PA8MXZ1 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 TRAPPC2LH3BP13 241 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A15PP0C7V4 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A13PP0C7W8 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A14PP0C7W9 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 FAM90A24PP0C7X0 464 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 MEOX1P50221 254 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 PLP2Q04941 152 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 HAGHLQ6PII5 290 aaPredicted RBP15.2■□□□□ 0.02
LRCH3-201ENST00000334859 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 SECTM1Q8WVN6 248 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 C12orf49Q9H741 205 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 MTCH1Q9NZJ7 389 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 PURGQ9UJV8 347 aaKnown RBP15.2■□□□□ 0.02
LRCH3-201ENST00000334859 C3orf85A0A1B0GTC6 90 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 ZNF724A8MTY0 619 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 MPPED1O15442 326 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 ST8SIA3O43173 380 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 TK1P04183 234 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 SP9P0CG40 484 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 COX5BP10606 129 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 CD59P13987 128 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 CTRB1P17538 263 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 ARR3P36575 388 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 ID4P47928 161 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 CTRB2Q6GPI1 263 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 NUFIP2Q7Z417 695 aaKnown RBP15.2■□□□□ 0.02
LRCH3-201ENST00000334859 DPPA2Q7Z7J5 298 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 CBLN2Q8IUK8 224 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 SPAG16Q8N0X2 631 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 UBAC2Q8NBM4 344 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 Q8NFD4 153 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 HIST1H2AAQ96QV6 131 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 NRIP2Q9BQI9 281 aa15.2■□□□□ 0.02
LRCH3-201ENST00000334859 URB1O60287 2271 aaKnown RBP15.2■□□□□ 0.02
LRCH3-201ENST00000334859 MT-CO3P00414 261 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 TSC22D1Q15714 1073 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 C10orf91Q5T1B1 145 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 SAXO1Q8IYX7 474 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 ZNF565Q8N9K5 539 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 SEC11CQ9BY50 192 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 PARP11Q9NR21 331 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 ZFP57Q9NU63 452 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 TMED3Q9Y3Q3 217 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 PRRC2CQ9Y520 2896 aaKnown RBP15.19■□□□□ 0.02
LRCH3-201ENST00000334859 SYNGR1O43759 233 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 GPR137BO60478 399 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 F2RL1P55085 397 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 RNPS1Q15287 305 aaKnown RBP15.19■□□□□ 0.02
LRCH3-201ENST00000334859 DHRS13Q6UX07 377 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 MKXQ8IYA7 352 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 POM121Q96HA1 1249 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 POM121L2Q96KW2 1035 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 Q9N2K0 584 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 PLA2G2EQ9NZK7 142 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 PRELID1Q9Y255 219 aa15.19■□□□□ 0.02
LRCH3-201ENST00000334859 RCL1Q9Y2P8 373 aaKnown RBP15.19■□□□□ 0.02
LRCH3-201ENST00000334859 UBE2J1Q9Y385 318 aaPredicted RBP15.19■□□□□ 0.02
LRCH3-201ENST00000334859 BORCS7-ASMTA0A0B4J1R7 106 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 CD300LBA8K4G0 201 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SNAPINO95295 136 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SP1P08047 785 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SCTP09683 121 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SFTA3P0C7M3 94 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 PRKACAP17612 351 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 HIKESHIQ53FT3 197 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 RCC2Q9P258 522 aaKnown RBP15.18■□□□□ 0.02
LRCH3-201ENST00000334859 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 KLF13Q9Y2Y9 288 aaPredicted RBP15.18■□□□□ 0.02
LRCH3-201ENST00000334859 LIPGQ9Y5X9 500 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 FRYQ5TBA9 3013 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 RNASEK-C17orf49H0YIS7 233 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 TSPAN9O75954 239 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 NAPSAO96009 420 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 OR8U9P0C7N5 309 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 GNRHRP30968 328 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 CD80P33681 288 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 APLNRP35414 380 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 NPBWR1P48145 328 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SRPXP78539 464 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 BTNL8Q6UX41 500 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 TBC1D26Q86UD7 250 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 FAM185AQ8N0U4 392 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 SUMF1Q8NBK3 374 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 OR8U1Q8NH10 309 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 ZNF488Q96MN9 340 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 GPHA2Q96T91 129 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 TMEM222Q9H0R3 208 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 PLSCR2Q9NRY7 297 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 FAM212BQ9NTI7 297 aaPredicted RBP15.18■□□□□ 0.02
LRCH3-201ENST00000334859 ZDHHC8Q9ULC8 765 aa15.18■□□□□ 0.02
LRCH3-201ENST00000334859 ANKRD30BLA7E2S9 258 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms