RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 AKR7A3O95154 331 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 FSTP19883 344 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 CAPZBP47756 277 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ADIPOQQ15848 244 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 NHLRC3Q5JS37 347 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 PRSS36Q5K4E3 855 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 SLC25A22Q9H936 323 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 MPC1Q9Y5U8 109 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 NMBP08949 121 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 PVRP15151 417 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 EDDM3AQ14507 147 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 KISS1Q15726 138 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 DMKNQ6E0U4 476 aaPredicted RBP4.91□□□□□ -1.62
PTPRB-202ENST00000334414 SPPL3Q8TCT6 385 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 LTBP4Q8N2S1 1624 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 CST7O76096 145 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF865P0CJ78 1059 aaPredicted RBP4.91□□□□□ -1.62
PTPRB-202ENST00000334414 GLIPR1P48060 266 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 MIEN1Q9BRT3 115 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 OR6C3Q9NZP0 311 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ADAMTS5Q9UNA0 930 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 PROCRQ9UNN8 238 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 A8MWL6 223 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 PSG9Q00887 426 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 CLEC18BQ6UXF7 455 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 SLC36A1Q7Z2H8 476 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 MUC15Q8N387 334 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 PTPMT1Q8WUK0 201 aaPredicted RBP4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ARHGAP5-AS1Q96IT6 56 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 OGG1O15527 345 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ID1P41134 155 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 TMEM255AQ5JRV8 349 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 MOB3AQ96BX8 217 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 DOCK1Q14185 1865 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 IQCF3P0C7M6 154 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 AVPR2P30518 371 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 COMPP49747 757 aaPredicted RBP4.91□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF600Q6ZNG1 722 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 DTD1Q8TEA8 209 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 KCNE1BA0A087WTH5 132 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 CDC14CA4D256 554 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 K7ESF4 209 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 LPAR6P43657 344 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 FMODQ06828 376 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 Q6AWC8 147 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 SLC35E4Q6ICL7 350 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 RBPMS2Q6ZRY4 209 aaKnown RBP4.91□□□□□ -1.62
PTPRB-202ENST00000334414 NIT1Q86X76 327 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 TGIF2LYQ8IUE0 185 aa4.91□□□□□ -1.62
PTPRB-202ENST00000334414 KIR2DL1P43626 348 aaPredicted RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 KIR2DL2P43627 348 aaPredicted RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 MRGPREQ86SM8 312 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 R3HDM4Q96D70 268 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 PDFQ9HBH1 243 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 H0Y980 276 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 ZFPL1O95159 310 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 GOSR1O95249 250 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 CCL5P13501 91 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 HYAL1Q12794 435 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 MRPS18AQ9NVS2 196 aaKnown RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 ATAD5Q96QE3 1844 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 B4E171 279 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 EPPINO95925 133 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 MICBQ29980 383 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 GAB4Q2WGN9 574 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 TUBA4BQ9H853 241 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF785A8K8V0 405 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 FXYD1O00168 92 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 IER3P46695 156 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 EMP1P54849 157 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 LSM6P62312 80 aaKnown RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 CLLU1OSQ5K130 101 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 TP53I13Q8NBR0 393 aaPredicted RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 GLRX2Q9NS18 164 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 NTMQ9P121 344 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 A0A1W2PQD3 144 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 OR4C46A6NHA9 309 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 FCMRO60667 390 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 CFDP00746 253 aaPredicted RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF770Q6IQ21 691 aaPredicted RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 C5orf17Q8NAS9 161 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 SYT8Q8NBV8 401 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 C4orf45Q96LM5 186 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 MRPL32Q9BYC8 188 aaKnown RBP4.9□□□□□ -1.62
PTPRB-202ENST00000334414 LPAR5Q9H1C0 372 aa4.9□□□□□ -1.62
PTPRB-202ENST00000334414 LOC390937A0A1W2PQ73 354 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 B4GALT3O60512 393 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 SLC25A26Q70HW3 274 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 PSMG3Q9BT73 122 aaPredicted RBP4.9□□□□□ -1.63
PTPRB-202ENST00000334414 RBKSQ9H477 322 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 CACNA1SQ13698 1873 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 S1PR2O95136 353 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 CD8AP01732 235 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 OPRM1P35372 400 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 NMUP48645 174 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 CCL14Q16627 93 aa4.9□□□□□ -1.63
PTPRB-202ENST00000334414 CTU1Q7Z7A3 348 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms