RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 SPACA1Q9HBV2 294 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SLC7A10Q9NS82 523 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 CDS2O95674 445 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 CD5P06127 495 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 ASCL1P50553 236 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 OR2C3Q8N628 320 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 RXFP4Q8TDU9 374 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 MSI2Q96DH6 328 aaKnown RBP10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 DEPPQ9NTK1 212 aa10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 RBM7Q9Y580 266 aaKnown RBP10.1□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 ZNF732B4DXR9 585 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 RPL36A-HNRNPH2H7BZ11 118 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SLC34A2O95436 690 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 PDGFBP01127 241 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 EDN3P14138 238 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 BCL3P20749 454 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 KRBOX4Q5JUW0 171 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 CPEB3Q8NE35 698 aaKnown RBP10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 PSMF1Q92530 271 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 APOBEC3DQ96AK3 386 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 C18orf12Q96KH6 178 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 TP53RKQ96S44 253 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 FAM173AQ9BQD7 235 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 FBXO7Q9Y3I1 522 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 FAM166BA8MTA8 275 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SSSCA1O60232 199 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 DANCRP0C864 163 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SPP1P10451 314 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 ZNF44P15621 663 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 Q0VFX4 171 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 APH1AQ96BI3 265 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 NTNG2Q96CW9 530 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SMOC1Q9H4F8 434 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SHANK1Q9Y566 2161 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 NKX2-6A6NCS4 301 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 ANKRD30BLA7E2S9 258 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 SLC33A1O00400 549 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 HSD17B6O14756 317 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 CEBPGP53567 150 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 LFNGQ8NES3 379 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 ADGRG7Q96K78 797 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 RSRP1Q9BUV0 290 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 MAGT1Q9H0U3 335 aa10.09□□□□□ -0.79
CSPG4P4Y-201ENST00000333235 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 C1QL1O75973 258 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FHITP49789 147 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 POLR2GP62487 172 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 EWSR1Q01844 656 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 TUSC5Q8IXB3 177 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 ZPBPQ9BS86 351 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 C20orf24Q9BUV8 137 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 BCL2L14Q9BZR8 327 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 TMEM222Q9H0R3 208 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 UMAD1C9J7I0 102 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 SNCAP37840 140 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 HOXA1P49639 335 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 RAB2AP61019 212 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 RAB1AP62820 205 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 BSCL2Q96G97 398 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 MED19A0JLT2 244 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A10PA6NDY2 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A18PA6NE21 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A16PA6NEW6 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A20PA6NIJ5 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A8PA6NJQ4 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A7PA6NKC0 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A22PA8MWA6 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A12PA8MX19 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A5PA8MXJ8 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A23PA8MXZ1 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 TRDCB7Z8K6 153 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 TERTO14746 1132 aaKnown RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 S100A9P06702 114 aaKnown RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 HEXAP06865 529 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 SERPINE2P07093 398 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 MMP7P09237 267 aaPredicted RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A15PP0C7V4 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A13PP0C7W8 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A14PP0C7W9 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 FAM90A24PP0C7X0 464 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 NRN1LQ496H8 165 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 LINC00696Q6ZRV3 163 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 TMEM217Q8N7C4 229 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 GINS3Q9BRX5 216 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 PLEKHF2Q9H8W4 249 aa10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 MRPS18CQ9Y3D5 142 aaKnown RBP10.08□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 MSTNO14793 375 aa10.07□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 ZNHIT1O43257 154 aa10.07□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 APLNRP35414 380 aa10.07□□□□□ -0.8
CSPG4P4Y-201ENST00000333235 PMELP40967 661 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms