RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 FAM185AQ8N0U4 392 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 ZNF321PQ8N8H1 164 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 SUMF1Q8NBK3 374 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 GPR119Q8TDV5 335 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 HDHD3Q9BSH5 251 aaPredicted RBP15.82■□□□□ 0.12
PKP3-201ENST00000331563 PECRQ9BY49 303 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 GPR84Q9NQS5 396 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 PNO1Q9NRX1 252 aaKnown RBP15.82■□□□□ 0.12
PKP3-201ENST00000331563 VAX2Q9UIW0 290 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 CEP192Q8TEP8 1941 aa15.82■□□□□ 0.12
PKP3-201ENST00000331563 C17orf105B2RV13 164 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 DXOO77932 396 aaKnown RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 IL33O95760 270 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 FGF5P12034 268 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 CAPZBP47756 277 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 NOVA1P51513 510 aaKnown RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 FUT7Q11130 342 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 RIPPLY2Q5TAB7 128 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 MED29Q9NX70 200 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 GNG13Q9P2W3 67 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 CHTOPQ9Y3Y2 248 aaKnown RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 XKRY2A2RUG3 117 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 FAM221AA4D161 298 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 B4DEV8 164 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 B4E171 279 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 IL11P20809 199 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 MEX3BQ6ZN04 569 aaKnown RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 C6orf201Q7Z4U5 140 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 OR4X1Q8NH49 305 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 TBL1XR1Q9BZK7 514 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 POLR2HP52434 150 aaKnown RBP15.81■□□□□ 0.12
PKP3-201ENST00000331563 C11orf40Q8WZ69 217 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 EXTL1Q92935 676 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 NAA60Q9H7X0 242 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 PLEKHJ1Q9NW61 149 aa15.81■□□□□ 0.12
PKP3-201ENST00000331563 CCDC163A0A0D9SF12 145 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 SLC33A1O00400 549 aaPredicted RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 NXPH2O95156 264 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 ONECUT2O95948 504 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 DBHP09172 617 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 ZNF728P0DKX0 622 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 PGCP20142 388 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 IL12BP29460 328 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 OR1D4P47884 311 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 ZNF506Q5JVG8 444 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 C1QL2Q7Z5L3 287 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 MRPL41Q8IXM3 137 aaKnown RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 OR2C3Q8N628 320 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 TMEM217Q8N7C4 229 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 CDH20Q9HBT6 801 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 LRFN1Q9P244 771 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 MRPS17Q9Y2R5 130 aaKnown RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 IL6RP08887 468 aaPredicted RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 POU3F1Q03052 451 aaPredicted RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 COA6Q5JTJ3 125 aaKnown RBP15.8■□□□□ 0.12
PKP3-201ENST00000331563 SSX7Q7RTT5 188 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 CMTM1Q8IZ96 169 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 FBXL14Q8N1E6 418 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 EMC6Q9BV81 110 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 LANCL2Q9NS86 450 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 TCFL5Q9UL49 500 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 ZFP30Q9Y2G7 519 aa15.8■□□□□ 0.12
PKP3-201ENST00000331563 ZFP92A6NM28 416 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 FASLGP48023 281 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 RUNX1Q01196 453 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 COL10A1Q03692 680 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 TMEM187Q14656 261 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 BOD1Q96IK1 185 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 MCTS1Q9ULC4 181 aaKnown RBP15.79■□□□□ 0.12
PKP3-201ENST00000331563 SERPINE3A8MV23 424 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 H0YIG0 161 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 MMP9P14780 707 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 NECAP1Q8NC96 275 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 ADPRHL1Q8NDY3 354 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 CLDND2Q8NHS1 167 aa15.79■□□□□ 0.12
PKP3-201ENST00000331563 RRP8O43159 456 aaKnown RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 PHF1O43189 567 aaPredicted RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 CST7O76096 145 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 PDGFBP01127 241 aaPredicted RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 OPRM1P35372 400 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 SLC25A26Q70HW3 274 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 RBMXL1Q96E39 390 aaKnown RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 GUCD1Q96NT3 240 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 HIST1H2AAQ96QV6 131 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 POLR3KQ9Y2Y1 108 aaPredicted RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 CYB5R3P00387 301 aaPredicted RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 CSNK1A1P48729 337 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 RRADP55042 308 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 NXPH1P58417 271 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 PRTGQ2VWP7 1150 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 LEMD1Q68G75 181 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 FAM180AQ6UWF9 173 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 LGI3Q8N145 548 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 OR5C1Q8NGR4 320 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 ELOVL1Q9BW60 279 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 GSX1Q9H4S2 264 aaPredicted RBP15.78■□□□□ 0.12
PKP3-201ENST00000331563 SERINC1Q9NRX5 453 aa15.78■□□□□ 0.12
PKP3-201ENST00000331563 RTTNQ86VV8 2226 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms