RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MKXQ8IYA7 352 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 LHFPL5Q8TAF8 219 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 EMG1Q92979 244 aaKnown RBP17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 TLN1Q9Y490 2541 aaKnown RBP17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 DBX1A6NMT0 343 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 ZNF83P51522 516 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 BTN1A1Q13410 526 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 MICBQ29980 383 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 ELP2Q6IA86 826 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 UNQ6126/PRO20091Q6UXV3 157 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 PHYHIPLQ96FC7 376 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 HDHD3Q9BSH5 251 aaPredicted RBP17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 OR51I2Q9H344 312 aa17.29■□□□□ 0.36
RIPPLY3-201ENST00000329553 A0A1B0GW55 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 IFNA6P05013 189 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L2P0CJ85 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L3P0CJ86 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L4P0CJ87 422 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L5P0CJ88 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L6P0CJ89 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4L7P0CJ90 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 LUMP51884 338 aaPredicted RBP17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 PPA1Q15181 289 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 ZNF573Q86YE8 665 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 MAFIPQ8WZ33 124 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 SULT4A1Q9BR01 284 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 PIGMQ9H3S5 423 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 DUX4Q9UBX2 424 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 NAAAQ02083 359 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 FAM74A1Q5RGS3 127 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 BCL2L14Q9BZR8 327 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 AK3Q9UIJ7 227 aa17.28■□□□□ 0.36
RIPPLY3-201ENST00000329553 PIEZO1Q92508 2521 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 TRAPPC2LH3BP13 241 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 SELEP16581 610 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 SNU13P55769 128 aaKnown RBP17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 FGF12P61328 243 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 C22orf34Q6ZV56 151 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 MUCL1Q96DR8 90 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 MS4A7Q9GZW8 240 aaPredicted RBP17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 FZR1Q9UM11 496 aa17.27■□□□□ 0.36
RIPPLY3-201ENST00000329553 M0R1B8 84 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 AKR1C4P17516 323 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 AMY2BP19961 511 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 FABP6P51161 128 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 RBPJQ06330 500 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 FAM76BQ5HYJ3 339 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 VAX1Q5SQQ9 334 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 MRGPRGQ86SM5 289 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 WDR86Q86TI4 376 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 CASTOR1Q8WTX7 329 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 ZNF488Q96MN9 340 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 MICU1Q9BPX6 476 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 RTL8AQ9BWD3 113 aa17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 PURGQ9UJV8 347 aaKnown RBP17.27■□□□□ 0.35
RIPPLY3-201ENST00000329553 CEACAM18A8MTB9 384 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 FAM25EA8MYX2 175 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 H0YL77 283 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TRIM77I1YAP6 450 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 OR7C1O76099 320 aaPredicted RBP17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TUBG1P23258 451 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 VAMP1P23763 118 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TAS2R31P59538 309 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TERB2Q8NHR7 220 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 THAP6Q8TBB0 222 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 MARCH1Q8TCQ1 289 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 DYRK2Q92630 601 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 POM121Q96HA1 1249 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 ADAT1Q9BUB4 502 aaKnown RBP17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TUBG2Q9NRH3 451 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 ZNF701Q9NV72 531 aaPredicted RBP17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 IL36RNQ9UBH0 155 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 ZZEF1O43149 2961 aa17.26■□□□□ 0.35
RIPPLY3-201ENST00000329553 TSPAN4O14817 238 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 PDCD6O75340 191 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 RHBDL1O75783 438 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 IL24Q13007 206 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 ATXN7L3Q14CW9 347 aaPredicted RBP17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 BEX5Q5H9J7 111 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 KCTD9Q7L273 389 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 CMSS1Q9BQ75 279 aaKnown RBP17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 ZNF471Q9BX82 626 aaPredicted RBP17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 PKIBQ9C010 78 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 NCOR2Q9Y618 2525 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 IGKV1D-8A0A087WSZ0 117 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 C3orf80F5H4A9 247 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 FUT3P21217 361 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 KLRB1Q12918 225 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 ZNF718Q3SXZ3 478 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 ACTBL2Q562R1 376 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 ARRDC1Q8N5I2 433 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 OR8G5Q8NG78 346 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 TMEM100Q9NV29 134 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 MBD2Q9UBB5 411 aa17.25■□□□□ 0.35
RIPPLY3-201ENST00000329553 TMEM128Q5BJH2 165 aa17.24■□□□□ 0.35
RIPPLY3-201ENST00000329553 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
RIPPLY3-201ENST00000329553 OR5H2Q8NGV7 314 aa17.24■□□□□ 0.35
RIPPLY3-201ENST00000329553 GPR132Q9UNW8 380 aa17.24■□□□□ 0.35
RIPPLY3-201ENST00000329553 FAM90A10PA6NDY2 464 aa17.24■□□□□ 0.35
RIPPLY3-201ENST00000329553 FAM90A18PA6NE21 464 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms