RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ARV1Q9H2C2 271 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 SPACA1Q9HBV2 294 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 UQCC1Q9NVA1 299 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 CRIM1Q9NZV1 1036 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 MPC1Q9Y5U8 109 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 BORCS7-ASMTA0A0B4J1R7 106 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 C3orf85A0A1B0GTC6 90 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 ST8SIA3O43173 380 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 CTXN2P0C2S0 81 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 CD46P15529 392 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 APLNRP35414 380 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 IGSF11Q5DX21 431 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 BATF2Q8N1L9 274 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 ZFP62Q8NB50 900 aaPredicted RBP19.18■□□□□ 0.66
PNKP-201ENST00000322344 CLRN3Q8NCR9 226 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 RIMS4Q9H426 269 aaPredicted RBP19.18■□□□□ 0.66
PNKP-201ENST00000322344 RHOFQ9HBH0 211 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 MTCH1Q9NZJ7 389 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 POMT1Q9Y6A1 747 aa19.18■□□□□ 0.66
PNKP-201ENST00000322344 WDFY3Q8IZQ1 3526 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 ANKRD30BLA7E2S9 258 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 TOR1AO14656 332 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 TNFSF15O95150 251 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 GLAP06280 429 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 LPAR6P43657 344 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 ZNF169Q14929 603 aaPredicted RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 LDLRAD3Q86YD5 345 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 PUSL1Q8N0Z8 303 aaKnown RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 NANOS1Q8WY41 292 aaKnown RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 GTF3AQ92664 365 aaKnown RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 FAM74A7A6NL05 159 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 OR5B21A6NL26 309 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 CDS2O95674 445 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 NGFP01138 241 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 F2RL1P55085 397 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 SRSF3P84103 164 aaKnown RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 FAM74A3Q4VXF1 159 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 FAM122CQ6P4D5 195 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 BTNL8Q6UX41 500 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 ZNF565Q8N9K5 539 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 OR5P3Q8WZ94 311 aa19.17■□□□□ 0.66
PNKP-201ENST00000322344 PURGQ9UJV8 347 aaKnown RBP19.17■□□□□ 0.66
PNKP-201ENST00000322344 TNRC6AQ8NDV7 1962 aaKnown RBP19.16■□□□□ 0.66
PNKP-201ENST00000322344 GPR31O00270 319 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 KCNJ3P48549 501 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 OR1K1Q8NGR3 316 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 TP53RKQ96S44 253 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 SMIM3Q9BZL3 60 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 TMEM222Q9H0R3 208 aa19.16■□□□□ 0.66
PNKP-201ENST00000322344 TRDCB7Z8K6 153 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 FBXO24O75426 580 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 GNRHRP30968 328 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 CLN3Q13286 438 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 C3AR1Q16581 482 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SWI5Q1ZZU3 235 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 HES3Q5TGS1 186 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 DHRS13Q6UX07 377 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 ZNF573Q86YE8 665 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SLC35G3Q8N808 338 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 OR4D5Q8NGN0 318 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 ERGIC1Q969X5 290 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 ZNF552Q9H707 407 aaPredicted RBP19.15■□□□□ 0.66
PNKP-201ENST00000322344 GP6Q9HCN6 339 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 FAM212BQ9NTI7 297 aaPredicted RBP19.15■□□□□ 0.66
PNKP-201ENST00000322344 CNTRLQ7Z7A1 2325 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SNAPINO95295 136 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SEC11BP0C7V7 166 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 GUCA2BQ16661 112 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 OR52M1Q8NGK5 317 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 NEK7Q8TDX7 302 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 TMEM56Q96MV1 263 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SPIN2AQ99865 258 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 SPIN2BQ9BPZ2 258 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 NRIP2Q9BQI9 281 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 PRSS50Q9UI38 385 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 ATP23Q9Y6H3 246 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 TMEM56-RWDD3S4R434 201 aa19.15■□□□□ 0.66
PNKP-201ENST00000322344 DUXBA0A1W2PPF3 345 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 TUSC2O75896 110 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 IL32P24001 234 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 GNG3P63215 75 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 GNMTQ14749 295 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 MEX3BQ6ZN04 569 aaKnown RBP19.14■□□□□ 0.65
PNKP-201ENST00000322344 UBE2J1Q9Y385 318 aaPredicted RBP19.14■□□□□ 0.65
PNKP-201ENST00000322344 CFAP54Q96N23 3096 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 ZDBF2Q9HCK1 2354 aa19.14■□□□□ 0.65
PNKP-201ENST00000322344 TRBV6-6A0A0A6YYG2 114 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 GLI4P10075 376 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 PRKACAP17612 351 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 FBXW9Q5XUX1 488 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 TBC1D26Q86UD7 250 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 IL22RA1Q8N6P7 574 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 BCL2L2Q92843 193 aaPredicted RBP19.13■□□□□ 0.65
PNKP-201ENST00000322344 HS3ST6Q96QI5 342 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 GINS3Q9BRX5 216 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 PKIBQ9C010 78 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 TLNRD1Q9H1K6 362 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 RCL1Q9Y2P8 373 aaKnown RBP19.13■□□□□ 0.65
PNKP-201ENST00000322344 LIPGQ9Y5X9 500 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 SYNGR1O43759 233 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms