RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 OR3A2P47893 321 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 MTCP1P56278 107 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 C3AR1Q16581 482 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 VAX1Q5SQQ9 334 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 OR10A2Q9H208 303 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 R4GN57 208 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 ATXN7O15265 892 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 FPR2P25090 351 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 CAMLGP49069 296 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 CLDN15P56746 228 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 RSU1Q15404 277 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 ZNF674Q2M3X9 581 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 CSNK2A3Q8NEV1 391 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 Q8WTZ3 238 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 MISP3Q96FF7 219 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 MGAQ8IWI9 3026 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 DEDDO75618 318 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 SCGB1D2O95969 90 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 GLI4P10075 376 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 TAF9Q16594 264 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 KHDC3LQ587J8 217 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST2H3AQ71DI3 136 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 LHFPL1Q86WI0 220 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 PRRX2Q99811 253 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 C19orf12Q9NSK7 152 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 DHRS3O75911 302 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 DDTP30046 118 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 TAS2R60P59551 318 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 CCL20P78556 96 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 ZNF529Q6P280 563 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 SGCZQ96LD1 299 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 URM1Q9BTM9 101 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 SPENQ96T58 3664 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-201ENST00000319854 LRRC3CA6NJW4 275 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 VAMP5O95183 116 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 DHRS13Q6UX07 377 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 OR5H2Q8NGV7 314 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 SPTSSAQ969W0 71 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 EHFQ9NZC4 300 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 SHANK1Q9Y566 2161 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A087X0M5 115 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A1B0GX30 115 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 ARGFXA6NJG6 315 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 OPRM1P35372 400 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 RRADP55042 308 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 B3GALT5-AS1P59052 145 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 ERVFRD-1P60508 538 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 RAC3P60763 192 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 HAGHQ16775 308 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 GGNQ86UU5 652 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 VASH2Q86V25 355 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 TMEM54Q969K7 222 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 MRPL24Q96A35 216 aaKnown RBP13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 GALNT14Q96FL9 552 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 SIGLEC12Q96PQ1 595 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 ZFHX2Q9C0A1 2572 aaPredicted RBP13.47□□□□□ -0.25
SHROOM1-201ENST00000319854 TGIF2-C20orf24A0A0A6YYL0 155 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 LMO1P25800 156 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 REEP6Q96HR9 211 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 OR51B6Q9H340 312 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 SH2D2AQ9NP31 389 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 ANAPC10Q9UM13 185 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 PTPRZ1P23471 2315 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 C9orf172C9J069 976 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 PRH1P02810 166 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 ASCL1P50553 236 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 CEBPGP53567 150 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 ELOBQ15370 118 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 STX12Q86Y82 276 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST3H2BBQ8N257 126 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 ARV1Q9H2C2 271 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 CALHM2Q9HA72 323 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A1W2PNU3 283 aaPredicted RBP13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 BTBD17A6NE02 478 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 NR2C1P13056 603 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 SRD5A2P31213 254 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms