RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 GVINP1Q7Z2Y8 2422 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 PCDH15Q96QU1 1955 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM82A0PJX8 343 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 PF4P02776 101 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 IL5P05113 134 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 RNFT1Q5M7Z0 435 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 NEIL1Q96FI4 390 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 C1QTNF5Q9BXJ0 243 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 PPP1R3EQ9H7J1 279 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 PDCD6O75340 191 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 HIST1H1DP16402 221 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 SURF2Q15527 256 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 Q56UQ5 140 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 STUMQ69YW2 141 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 LRRTM1Q86UE6 522 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 BEST4Q8NFU0 473 aa7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 SEBOXQ9HB31 216 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-201ENST00000317968 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 RAMP1O60894 148 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 NCR3LG1Q68D85 454 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 DUSP18Q8NEJ0 188 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 LINC01560Q8TB33 94 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 PCGF1Q9BSM1 259 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 SLC25A10Q9UBX3 287 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 MBD3L4A6NDZ8 208 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 MBD3L3A6NE82 208 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 MBD3L5A6NJ08 208 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 GZMHP20718 246 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 AADACP22760 399 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 OR5H6Q8NGV6 325 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 MBD3L2Q8NHZ7 208 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 SEH1LQ96EE3 360 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 DHRS9Q9BPW9 319 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ZNF649Q9BS31 505 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 MIXL1Q9H2W2 232 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ZNF785A8K8V0 405 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CELA3AP09093 270 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 DTYMKP23919 212 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CAMLGP49069 296 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 UCP2P55851 309 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 HNF4GQ14541 408 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ATP5SQ99766 215 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CLCF1Q9UBD9 225 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 IGHV3-64DA0A0J9YX35 117 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM272A0A1B0GTI8 110 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 A0A1W2PN81 502 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 F5H0A9 414 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ARPC1BO15143 372 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 PHF1O43189 567 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CHRNA7P36544 502 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 PMELP40967 661 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 IDO2Q6ZQW0 420 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 ZDHHC22Q8N966 263 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 OR52N4Q8NGI2 321 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CNTD2Q9H8S5 307 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 V9GYH0 126 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 V9GYS6 101 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 TRAV8-7A0A075B6U6 113 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 OR5H8P0DN80 308 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 PF4V1P10720 104 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 RPS27AP62979 156 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 TAGLNQ01995 201 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 CEACAM21Q3KPI0 293 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM30BQ3MIR4 351 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 C20orf85Q9H1P6 137 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 PLSCR4Q9NRQ2 329 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 TINAGQ9UJW2 476 aa7.41□□□□□ -1.22
PDLIM5-201ENST00000317968 GOSR2O14653 212 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 TM4SF5O14894 197 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 PIN1P1O15428 100 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 BAXQ07812 192 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 OR8H1Q8NGG4 311 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 SDSLQ96GA7 329 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 OOEPA6NGQ2 149 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 CFPP27918 469 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 OTX1P32242 354 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 DGCR2P98153 550 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 OR5B12Q96R08 314 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 CBLN4Q9NTU7 201 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 RASL12Q9NYN1 266 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 ALPK2Q86TB3 2170 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 HLA-DQB1P01920 261 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 ARG1P05089 322 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 DAOP14920 347 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 TAS2R45P59539 299 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 LRRC37A5PQ49AS3 106 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 ATPAF1Q5TC12 328 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 ZNF529Q6P280 563 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 NTNG2Q96CW9 530 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 GINS3Q9BRX5 216 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 GPR61Q9BZJ8 451 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 IL36GQ9NZH8 169 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 HSF4Q9ULV5 492 aa7.4□□□□□ -1.22
PDLIM5-201ENST00000317968 NUP210LQ5VU65 1888 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms