RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 HMGN3Q15651 99 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 BHLHE23Q8NDY6 225 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 GTF3AQ92664 365 aaKnown RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 ZNF552Q9H707 407 aaPredicted RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 FBXL17Q9UF56 701 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 H7C2Y5 167 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 PPYP01298 95 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 S100GP29377 79 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 SRYQ05066 204 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 FAM76BQ5HYJ3 339 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 HAGHLQ6PII5 290 aaPredicted RBP12.84□□□□□ -0.35
CHFR-202ENST00000315585 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 ZNF565Q8N9K5 539 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 SPEGQ15772 3267 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 TRAPPC2LH3BP13 241 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 NKX2-8O15522 239 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.35
CHFR-202ENST00000315585 IL32P24001 234 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 PRDX4Q13162 271 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 OR5L1Q8NGL2 311 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 EXTL1Q92935 676 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.35
CHFR-202ENST00000315585 ABHD14BQ96IU4 210 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 PRELID1Q9Y255 219 aa12.83□□□□□ -0.35
CHFR-202ENST00000315585 C5orf49A4QMS7 147 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 ZNF891A8MT65 544 aaPredicted RBP12.83□□□□□ -0.36
CHFR-202ENST00000315585 MPPED1O15442 326 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 MBPP02686 304 aaPredicted RBP12.83□□□□□ -0.36
CHFR-202ENST00000315585 CELA3AP09093 270 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 CCNOP22674 350 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 RND3P61587 244 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 FLI1Q01543 452 aaPredicted RBP12.83□□□□□ -0.36
CHFR-202ENST00000315585 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.83□□□□□ -0.36
CHFR-202ENST00000315585 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 GLYATL2Q8WU03 294 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 LIME1Q9H400 295 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 CALHM2Q9HA72 323 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 AMDHD2Q9Y303 409 aa12.83□□□□□ -0.36
CHFR-202ENST00000315585 FRYLO94915 3013 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 TM4SF5O14894 197 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 GLAP06280 429 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 HAAOP46952 286 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 RTP5Q14D33 572 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 MST1LQ2TV78 715 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 SP6Q3SY56 376 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 OR2A2Q6IF42 318 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
CHFR-202ENST00000315585 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 NANOS1Q8WY41 292 aaKnown RBP12.82□□□□□ -0.36
CHFR-202ENST00000315585 CYYR1Q96J86 154 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 MPC1Q9Y5U8 109 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 MSTNO14793 375 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 IGHV3-9P01782 118 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 AADACP22760 399 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 TNFSF10P50591 281 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 CCL11P51671 97 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
CHFR-202ENST00000315585 OR4A4PQ8NGN8 299 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
CHFR-202ENST00000315585 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
CHFR-202ENST00000315585 ANKRD30BLA7E2S9 258 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 GPR31O00270 319 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 H2AFB1P0C5Y9 115 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 AKR1C2P52895 323 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 AKR1C1Q04828 323 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 BTNL8Q6UX41 500 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 LYZL2Q7Z4W2 148 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 ZNF573Q86YE8 665 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 CMTM1Q8IZ96 169 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 MARS2Q96GW9 593 aaKnown RBP12.81□□□□□ -0.36
CHFR-202ENST00000315585 NRIP2Q9BQI9 281 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 Q9N2K0 584 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 RCC2Q9P258 522 aaKnown RBP12.81□□□□□ -0.36
CHFR-202ENST00000315585 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 FAM221AA4D161 298 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 OR5B21A6NL26 309 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 FBXO24O75426 580 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 APLNRP35414 380 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 RAB1AP62820 205 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 DHRS7BQ6IAN0 325 aaPredicted RBP12.81□□□□□ -0.36
CHFR-202ENST00000315585 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 LYPD6BQ8NI32 183 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms