RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 Q96M66 194 aa13.6□□□□□ -0.23
TUBB3-201ENST00000315491 NICN1Q9BSH3 213 aa13.6□□□□□ -0.23
TUBB3-201ENST00000315491 COPZ2Q9P299 210 aa13.6□□□□□ -0.23
TUBB3-201ENST00000315491 PPP1R3CQ9UQK1 317 aa13.6□□□□□ -0.23
TUBB3-201ENST00000315491 RAI1Q7Z5J4 1906 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-201ENST00000315491 C3orf80F5H4A9 247 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 HPXP02790 462 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 CPT2P23786 658 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 NUP62P37198 522 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-201ENST00000315491 GMFBP60983 142 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 PIGYQ3MUY2 71 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 THAP7Q9BT49 309 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-201ENST00000315491 DLL4Q9NR61 685 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 TREM2Q9NZC2 230 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 RNF7Q9UBF6 113 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 ST3GAL6Q9Y274 331 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 PKDREJQ9NTG1 2253 aa13.59□□□□□ -0.23
TUBB3-201ENST00000315491 A0A0A6YYD4 124 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 SRRM5B3KS81 715 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 SCGNO76038 276 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 NXPH2O95156 264 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 CHRM2P08172 466 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 IRF2P14316 349 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 GLRA1P23415 457 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 CDK2P24941 298 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 RBMXP38159 391 aaKnown RBP13.58□□□□□ -0.23
TUBB3-201ENST00000315491 PITPNBP48739 271 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 VEGFCP49767 419 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 SNU13P55769 128 aaKnown RBP13.58□□□□□ -0.23
TUBB3-201ENST00000315491 RBM11P57052 281 aaKnown RBP13.58□□□□□ -0.23
TUBB3-201ENST00000315491 IZUMO1Q8IYV9 350 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 GCSAMQ8N6F7 178 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 HES4Q9HCC6 221 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 IFT46Q9NQC8 304 aa13.58□□□□□ -0.23
TUBB3-201ENST00000315491 LRRK2Q5S007 2527 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 A0A0A6YYH2 397 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 A6NJ64 397 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 H7C417 338 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 RAB27BO00194 218 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 WNT9BO14905 357 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 XRCC3O43542 346 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 EGR1P18146 543 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 HOXA4Q00056 320 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-201ENST00000315491 DHODHQ02127 395 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 BTN1A1Q13410 526 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 TAF9Q16594 264 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 MOGAT2Q3SYC2 334 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 NHLRC3Q5JS37 347 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 RAB12Q6IQ22 244 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 FAM89BQ8N5H3 189 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 OR56B1Q8NGI3 324 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 NEU4Q8WWR8 484 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-201ENST00000315491 LINC00052Q96N35 136 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
TUBB3-201ENST00000315491 WDR13Q9H1Z4 485 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 SDHAF2Q9NX18 166 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 IL36RNQ9UBH0 155 aa13.58□□□□□ -0.24
TUBB3-201ENST00000315491 SPTAN1Q13813 2472 aaKnown RBP13.57□□□□□ -0.24
TUBB3-201ENST00000315491 ARFGEF3Q5TH69 2177 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 LRRC30A6NM36 301 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 GEMIN2O14893 280 aaKnown RBP13.57□□□□□ -0.24
TUBB3-201ENST00000315491 SOCS1O15524 211 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 CYB5R3P00387 301 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-201ENST00000315491 CFDP00746 253 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-201ENST00000315491 LHBP01229 141 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 GABRR1P24046 479 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 CDKN1AP38936 164 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 ACP7Q6ZNF0 438 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 TGIF2LYQ8IUE0 185 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 BOLLQ8N9W6 283 aaKnown RBP13.57□□□□□ -0.24
TUBB3-201ENST00000315491 OR10R2Q8NGX6 335 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 MARC2Q969Z3 335 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 POM121Q96HA1 1249 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 RASL12Q9NYN1 266 aa13.57□□□□□ -0.24
TUBB3-201ENST00000315491 IGHV1-69-2A0A0G2JMI3 117 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 H3BUI4 141 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 TCRBP04435 133 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 CXCL3P19876 107 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 CBX5P45973 191 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 TAS2R20P59543 309 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 IL13RA2Q14627 380 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 FIP1L1Q6UN15 594 aaKnown RBP13.56□□□□□ -0.24
TUBB3-201ENST00000315491 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 IGFBPL1Q8WX77 278 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 NUDT16L1Q9BRJ7 211 aaKnown RBP13.56□□□□□ -0.24
TUBB3-201ENST00000315491 ZNF436Q9C0F3 470 aaPredicted RBP13.56□□□□□ -0.24
TUBB3-201ENST00000315491 TMEM106BQ9NUM4 274 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
TUBB3-201ENST00000315491 MRPS7Q9Y2R9 242 aaKnown RBP13.56□□□□□ -0.24
TUBB3-201ENST00000315491 TRAV18A0A075B6X5 111 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A10PA6NDY2 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A18PA6NE21 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A16PA6NEW6 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A20PA6NIJ5 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A8PA6NJQ4 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FOXI3A8MTJ6 420 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A22PA8MWA6 464 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms