RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 HACD4Q5VWC8 232 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 CHST6Q9GZX3 395 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 PCDHB10Q9UN67 800 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 ARHGAP32A7KAX9 2087 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 TRAV38-1A0A0B4J264 116 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 CEACAM18A8MTB9 384 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 SMAD7O15105 426 aaKnown RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 ADAM20O43506 726 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 GSTZ1O43708 216 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 CD3GP09693 182 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 GTF2F2P13984 249 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 PRDX2P32119 198 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 RNASE12Q5GAN4 147 aaKnown RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 TEX36Q5VZQ5 186 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 BIVMQ86UB2 503 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 BPIFB2Q8N4F0 458 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 ANGPTL6Q8NI99 470 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 LPAR2Q9HBW0 351 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 MYOZ1Q9NP98 299 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 RABL2AQ9UBK7 228 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 CTSZQ9UBR2 303 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 RABL2BQ9UNT1 228 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 FLNAP21333 2647 aaKnown RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 CREBBPQ92793 2442 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 A0A0B4J293 547 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 FAM240BA0A1B0GVZ2 78 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 VWC2LB2RUY7 222 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 FCN3O75636 299 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 BPNT1O95861 308 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 EIF2B2P49770 351 aaKnown RBP15.15■□□□□ 0.02
HMGA1-201ENST00000311487 SCAND1P57086 179 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 FGF12P61328 243 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 COL10A1Q03692 680 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 STUMQ69YW2 141 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 PLET1Q6UQ28 207 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 OR51T1Q8NGJ9 327 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 CLDND2Q8NHS1 167 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 RAB40AQ8WXH6 277 aa15.15■□□□□ 0.02
HMGA1-201ENST00000311487 ACANP16112 2415 aa15.14■□□□□ 0.02
HMGA1-201ENST00000311487 IFNL4K9M1U5 179 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 PHF1O43189 567 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-201ENST00000311487 OR7C1O76099 320 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-201ENST00000311487 HAND1O96004 215 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF44P15621 663 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 Q8IYB0 196 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 ASCC1Q8N9N2 400 aaKnown RBP15.14■□□□□ 0.01
HMGA1-201ENST00000311487 SMIM4Q8WVI0 70 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM59Q9BXS4 323 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 RASL12Q9NYN1 266 aa15.14■□□□□ 0.01
HMGA1-201ENST00000311487 A0A0A6YYD4 124 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 OR2H2O95918 312 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 ACAA1P09110 424 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 RPS2P15880 293 aaKnown RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 MUC1P15941 1255 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 RBM11P57052 281 aaKnown RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 ATAD3CQ5T2N8 411 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 RSBN1Q5VWQ0 802 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 ELP2Q6IA86 826 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 UPRTQ96BW1 309 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 S100A16Q96FQ6 103 aaKnown RBP15.13■□□□□ 0.01
HMGA1-201ENST00000311487 GAFA1Q96PS6 74 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 REG4Q9BYZ8 158 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 CST11Q9H112 138 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 AUNIPQ9H7T9 357 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 MAB21L2Q9Y586 359 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM14DPA8MWL7 114 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 DEGS1O15121 323 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 PSPNO60542 156 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 SLC6A1P30531 599 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 BTCP35070 178 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 DSCR9P59020 149 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 MOGAT2Q3SYC2 334 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 KCNG3Q8TAE7 436 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 DYRK2Q92630 601 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 IL36GQ9NZH8 169 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF222Q9UK12 451 aa15.13■□□□□ 0.01
HMGA1-201ENST00000311487 NDUFS8O00217 210 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 TNFRSF13BO14836 293 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-201ENST00000311487 SOCS1O15524 211 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF780AO75290 641 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-201ENST00000311487 KNG1P01042 644 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 VEGFCP49767 419 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 CAPZA1P52907 286 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 NKAPLQ5M9Q1 402 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 SHEQ5VZ18 495 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 TOMM5Q8N4H5 51 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 TPRX1Q8N7U7 411 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM185AQ8NFB2 350 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 MARVELD1Q9BSK0 173 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 ATG5Q9H1Y0 275 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 PPA2Q9H2U2 334 aa15.12■□□□□ 0.01
HMGA1-201ENST00000311487 ZMAT3Q9HA38 289 aaKnown RBP15.12■□□□□ 0.01
HMGA1-201ENST00000311487 SH2D1BO14796 132 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 LDLRAD4O15165 306 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 UBBP0CG47 229 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 USF1P22415 310 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 CDK2P24941 298 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 MNDAP41218 407 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 PLA1AQ53H76 456 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 Q6P435 159 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms