RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 Q6P435 159 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 LYG1Q8N1E2 194 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 ABHD12Q8N2K0 398 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 PARP16Q8N5Y8 322 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 ZNF555Q8NEP9 628 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 OR4P4Q8NGL7 312 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 CFHR4Q92496 578 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 OR5M11Q96RB7 305 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 NR1H4Q96RI1 486 aaPredicted RBP15.71■□□□□ 0.11
LIME1-201ENST00000309546 GPER1Q99527 375 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 PRSS22Q9GZN4 317 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 RHOFQ9HBH0 211 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 SERTAD4Q9NUC0 356 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 A0A0G2JK05 382 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 ODAMA1E959 279 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 SLC33A1O00400 549 aaPredicted RBP15.7■□□□□ 0.1
LIME1-201ENST00000309546 RPSAP08865 295 aaKnown RBP15.7■□□□□ 0.1
LIME1-201ENST00000309546 RAB3AP20336 220 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 LMO1P25800 156 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 PTGFRP43088 359 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 SMN1Q16637 294 aaKnown RBP15.7■□□□□ 0.1
LIME1-201ENST00000309546 ZSCAN26Q16670 478 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 SATL1Q86VE3 508 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 CHST4Q8NCG5 386 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 COQ2Q96H96 371 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 FAM192AQ9GZU8 254 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 SMPD3Q9NY59 655 aaPredicted RBP15.7■□□□□ 0.1
LIME1-201ENST00000309546 TAS2R3Q9NYW6 316 aa15.7■□□□□ 0.1
LIME1-201ENST00000309546 MAGEB3O15480 346 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 LIMS3P0CW19 117 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 LIMS4P0CW20 117 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 GDNFP39905 211 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 MTNR1BP49286 362 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 NSUN5P1Q3KNT7 163 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 HEPN1Q6WQI6 88 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 RTN4RL2Q86UN3 420 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 Q8N2B8 174 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 OR51A2Q8NGJ7 313 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 ZNF596Q8TC21 504 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 TNFAIP8L1Q8WVP5 186 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 JAM3Q9BX67 310 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 PPIL3Q9H2H8 161 aaKnown RBP15.69■□□□□ 0.1
LIME1-201ENST00000309546 ZNF286AQ9HBT8 521 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 TAS2R4Q9NYW5 299 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 NOTCH1P46531 2555 aa15.69■□□□□ 0.1
LIME1-201ENST00000309546 H0YJX3 145 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 GABRPO00591 440 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 WBP4O75554 376 aaKnown RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 ALX3O95076 343 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 CSN2P05814 226 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 CD28P10747 220 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 CD24P25063 80 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 GLP1RP43220 463 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 VDAC2P45880 294 aaPredicted RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 BLCAPP62952 87 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 CDK5R1Q15078 307 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 TMEM95Q3KNT9 176 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 PAN3Q58A45 887 aaKnown RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 OR4D6Q8NGJ1 314 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 HAVCR2Q8TDQ0 301 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 RGP1Q92546 391 aaPredicted RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 CORO2AQ92828 525 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 STMN2Q93045 179 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 CPNE2Q96FN4 548 aaPredicted RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 MRPS18AQ9NVS2 196 aaKnown RBP15.68■□□□□ 0.1
LIME1-201ENST00000309546 DPM3Q9P2X0 92 aa15.68■□□□□ 0.1
LIME1-201ENST00000309546 H3BUI4 141 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 TOR1AO14656 332 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 BDH1Q02338 343 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 RBM39Q14498 530 aaKnown RBP15.67■□□□□ 0.1
LIME1-201ENST00000309546 OR2G6Q5TZ20 316 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 XAF1Q6GPH4 301 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 Q6ZS46 218 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 OR10K1Q8NGX5 313 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 CNIH3Q8TBE1 160 aa15.67■□□□□ 0.1
LIME1-201ENST00000309546 FGF20Q9NP95 211 aaPredicted RBP15.67■□□□□ 0.1
LIME1-201ENST00000309546 ZNF729A6NN14 1252 aaPredicted RBP15.66■□□□□ 0.1
LIME1-201ENST00000309546 LEUTXA8MZ59 168 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 PLXNB1O43157 2135 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 CLIC3O95833 236 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 OPN1MWP04001 364 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 CD2P06729 351 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 OPN1MW2P0DN77 364 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 OPN1MW3P0DN78 364 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 NFYBP25208 207 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 BRS3P32247 399 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 ETV1P50549 477 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 ARHGDIBP52566 201 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 RSU1Q15404 277 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 RPL22L1Q6P5R6 122 aaKnown RBP15.66■□□□□ 0.1
LIME1-201ENST00000309546 TMPRSS11AQ6ZMR5 421 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 PXT1Q8NFP0 134 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 GPR148Q8TDV2 347 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 CAPSLQ8WWF8 208 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 RDH12Q96NR8 316 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 OR6C3Q9NZP0 311 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 KIF25Q9UIL4 384 aa15.66■□□□□ 0.1
LIME1-201ENST00000309546 MEIKINA0A087WXM9 373 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 FAM90A22PA8MWA6 464 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 G3V4G9 280 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms