RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 C10orf128Q5T292 105 aa16.13■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF774Q6NX45 483 aa16.13■□□□□ 0.17
RAPH1-201ENST00000308091 RTN4IP1Q8WWV3 396 aaPredicted RBP16.13■□□□□ 0.17
RAPH1-201ENST00000308091 THOC3Q96J01 351 aaKnown RBP16.13■□□□□ 0.17
RAPH1-201ENST00000308091 LIPGQ9Y5X9 500 aa16.13■□□□□ 0.17
RAPH1-201ENST00000308091 CCDC163A0A0D9SF12 145 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 CYTIPO60759 359 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 ZIC4Q8N9L1 334 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 OR52M1Q8NGK5 317 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 ABHD5Q8WTS1 349 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF700Q9H0M5 742 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF728P0DKX0 622 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 OMGP23515 440 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 IL2RGP31785 369 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 ABCA11PQ4W5N1 156 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 AKR1C8PQ5T2L2 129 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 DNASE2BQ8WZ79 361 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 PBDC1Q9BVG4 233 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 METTL9Q9H1A3 318 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 PCED1AQ9H1Q7 454 aa16.12■□□□□ 0.17
RAPH1-201ENST00000308091 TP53I11O14683 189 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 RRP8O43159 456 aaKnown RBP16.11■□□□□ 0.17
RAPH1-201ENST00000308091 GAPDHP04406 335 aaKnown RBP16.11■□□□□ 0.17
RAPH1-201ENST00000308091 SRXN1Q9BYN0 137 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 CCDC187A0A096LP49 1063 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF705GA8MUZ8 300 aaPredicted RBP16.11■□□□□ 0.17
RAPH1-201ENST00000308091 EREGO14944 169 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 ZIC3O60481 467 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 NTF4P34130 210 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF133P52736 654 aaPredicted RBP16.11■□□□□ 0.17
RAPH1-201ENST00000308091 RAB1AP62820 205 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 TMEM187Q14656 261 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 SLC22A25Q6T423 547 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 CYB561D1Q8N8Q1 229 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 SPTSSAQ969W0 71 aa16.11■□□□□ 0.17
RAPH1-201ENST00000308091 C19orf25Q9UFG5 118 aaPredicted RBP16.11■□□□□ 0.17
RAPH1-201ENST00000308091 IGKV1-12A0A0C4DH73 117 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 A0A0J9YW62 118 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 TNFSF12O43508 249 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 IGKV1D-12P01611 117 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 PGA5P0DJD9 388 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 PCOLCEQ15113 449 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 C5orf24Q7Z6I8 188 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 PHF7Q9BWX1 381 aaPredicted RBP16.1■□□□□ 0.17
RAPH1-201ENST00000308091 NAA60Q9H7X0 242 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 PROK2Q9HC23 129 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 LY6G6EA0A0G2JKS1 128 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 ZNHIT1O43257 154 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 SCAF4O95104 1147 aaKnown RBP16.1■□□□□ 0.17
RAPH1-201ENST00000308091 LCATP04180 440 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 COX5BP10606 129 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 HIST1H3AP68431 136 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 ARL6IP1Q15041 203 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 HIST2H3PS2Q5TEC6 136 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 MAML2Q8IZL2 1156 aaPredicted RBP16.1■□□□□ 0.17
RAPH1-201ENST00000308091 NECAP2Q9NVZ3 263 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 U3KQA8 63 aa16.1■□□□□ 0.17
RAPH1-201ENST00000308091 A0A087WZY1 265 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 TOX3O15405 576 aaPredicted RBP16.09■□□□□ 0.17
RAPH1-201ENST00000308091 FBXL14Q8N1E6 418 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 TMEM68Q96MH6 324 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 ALKBH3Q96Q83 286 aaPredicted RBP16.09■□□□□ 0.17
RAPH1-201ENST00000308091 SLC2A9Q9NRM0 540 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 DECR2Q9NUI1 292 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 FOXD3Q9UJU5 478 aaPredicted RBP16.09■□□□□ 0.17
RAPH1-201ENST00000308091 DKKL1Q9UK85 242 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 KCNIP3Q9Y2W7 256 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 WDFY4Q6ZS81 3184 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 CA11O75493 328 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 RND3P61587 244 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 ZNF429Q86V71 674 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 LRP11Q86VZ4 500 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 NEU1Q99519 415 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 BORCS7-ASMTA0A0B4J1R7 106 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 B4GALT1P15291 398 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 MRPL14Q6P1L8 145 aaKnown RBP16.09■□□□□ 0.17
RAPH1-201ENST00000308091 MEX3BQ6ZN04 569 aaKnown RBP16.09■□□□□ 0.17
RAPH1-201ENST00000308091 Q6ZPA2 131 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 HIST1H2BLQ99880 126 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 HSF4Q9ULV5 492 aa16.09■□□□□ 0.17
RAPH1-201ENST00000308091 SMCO3A2RU48 225 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 E5RGE8 158 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 LIFP15018 202 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 ECI1P42126 302 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 PPA1Q15181 289 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 FOXL2NBQ6ZUU3 175 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 NSG2Q9Y328 171 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 RBFOX3A6NFN3 312 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 SEC11BP0C7V7 166 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 CRYGSP22914 178 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 ZNF468Q5VIY5 522 aaPredicted RBP16.08■□□□□ 0.16
RAPH1-201ENST00000308091 RTL6Q6ICC9 239 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 SUMF1Q8NBK3 374 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 BORCS8Q96FH0 119 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 GPHA2Q96T91 129 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 PLEKHA2Q9HB19 425 aa16.08■□□□□ 0.16
RAPH1-201ENST00000308091 HSD17B6O14756 317 aa16.07■□□□□ 0.16
RAPH1-201ENST00000308091 PHF1O43189 567 aaPredicted RBP16.07■□□□□ 0.16
RAPH1-201ENST00000308091 EIF3IQ13347 325 aaKnown RBP16.07■□□□□ 0.16
RAPH1-201ENST00000308091 ZNF664Q8N3J9 261 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms