RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 A0A1W2PR77 199 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 NPIPB13A6NJU9 1138 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 HAX1O00165 279 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PSMB6P28072 239 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 DLX1P56177 255 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF117Q03924 483 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 OTOSQ8NHW6 89 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A40Q8TBP6 338 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PTP4A1Q93096 173 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TRAV1-2A0A0B4J238 106 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 UBE2L5PA0A1B0GUS4 154 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PHOX2AO14813 284 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 NEURL1O76050 574 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 GIPP09681 153 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 OR5AL1P0C617 328 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FAHP16930 419 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 OR3A1P47881 315 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 GABRA6Q16445 453 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 LAX1Q8IWV1 398 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 EID2BQ96D98 161 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 ANXA10Q9UJ72 324 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 MED12LQ86YW9 2145 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PATE3B3GLJ2 98 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 CA11O75493 328 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 LALBAP00709 142 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 HTN1P15515 57 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 MGMTP16455 207 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 EMDP50402 254 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 BTG1P62324 171 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 TMUB2Q71RG4 321 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 OR2I1PQ8NGU4 316 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 ALKBH3Q96Q83 286 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 J3QW42 95 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 NAT2P11245 290 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PLAURQ03405 335 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 HLXQ14774 488 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 VWA1Q6PCB0 445 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 NKAIN4Q8IVV8 208 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 TMED6Q8WW62 240 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 MRPL37Q9BZE1 423 aaKnown RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FGF20Q9NP95 211 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 NCOA6Q14686 2063 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 TRBV23-1A0A0A0MS06 115 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PLPP3O14495 311 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 CELA2BP08218 269 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 SHISA5Q8N114 240 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 OR8B4Q96RC9 309 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 C20orf27Q9GZN8 174 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 SAP30LQ9HAJ7 183 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 GNG4P50150 75 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 ANKRD34AQ69YU3 496 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 OR10Z1Q8NGY1 313 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 Q8WTZ3 238 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PTDSS2Q9BVG9 487 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 RANGRFQ9HD47 186 aaPredicted RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 UQCC1Q9NVA1 299 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A37Q9NYZ2 338 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FCMRO60667 390 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 C1QAP02745 245 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 LIMK1P53667 647 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 PCBP3P57721 371 aaKnown RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 FAHD1Q6P587 224 aa7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 MRPS18CQ9Y3D5 142 aaKnown RBP7.37□□□□□ -1.23
PCDHB1-201ENST00000306549 A0A1W2PPV9 198 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 B3GALT4O96024 378 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 RAE1P78406 368 aaKnown RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 KIAA0040Q15053 153 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 OR2W3Q7Z3T1 314 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 OR4S2Q8NH73 311 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 NTMQ9P121 344 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ANKHD1Q8IWZ3 2542 aaKnown RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 EML6Q6ZMW3 1958 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 PGA3P0DJD8 388 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM30BQ3MIR4 351 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 Q3ZCU0 254 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 OR5AP2Q8NGF4 316 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 C2orf50Q96LR7 162 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 RHNO1Q9BSD3 238 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 CD40P25942 277 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 CEACAM6P40199 344 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 KRTDAPP60985 99 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 LYZP61626 148 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ZBTB44Q8NCP5 570 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 RTN4IP1Q8WWV3 396 aaPredicted RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 KTI12Q96EK9 354 aaPredicted RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF230Q9UIE0 474 aaPredicted RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 SIGLEC7Q9Y286 467 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 HOXB3P14651 431 aaPredicted RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 PDPNQ86YL7 162 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 C5orf17Q8NAS9 161 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 EXTL1Q92935 676 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 EBLN2Q6P2I7 272 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms